Evidence map›Paper›PMID 34365752›Full record

ArticleThe plant pathology journal2021

Microbial Community Dysbiosis and Functional Gene Content Changes in Apple Flowers due to Fire Blight.

Hyun Gi Kong, Hyeonheui Ham, Mi-Hyun Lee, Dong Suk Park, Yong Hwan Lee

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in The plant pathology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hyun Gi KongCrop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju 54875, Korea.
Hyeonheui HamCrop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju 54875, Korea.
Mi-Hyun LeeCrop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju 54875, Korea.
Dong Suk ParkCrop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju 54875, Korea.
Yong Hwan LeeCrop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju 54875, Korea.
Rural Development Administration · KR

Funding

Rural Development Administration PJ014934
6 · The paper itself

Abstract

Despite the plant microbiota plays an important role in plant health, little is known about the potential interactions of the flower microbiota with pathogens. In this study, we investigated the microbial community of apple blossoms when infected with Erwinia amylovora. The long-read sequencing technology, which significantly increased the genome sequence resolution, thus enabling the characterization of fire blight-induced changes in the flower microbial community. Each sample showed a unique microbial community at the species level. Pantoea agglomerans and P. allii were the most predominant bacteria in healthy flowers, whereas E. amylovora comprised more than 90% of the microbial population in diseased flowers. Furthermore, gene function analysis revealed that glucose and xylose metabolism were enriched in diseased flowers. Overall, our results showed that the microbiome of apple blossoms is rich in specific bacteria, and the nutritional composition of flowers is important for the incidence and spread of bacterial disease.

Indexed as

apple flowerfire blightfull-length 16S rRNA sequencinggene predictionmicrobiome

Identifiers

PMID34365752
PMCPMC8357563
OpenAlexW3189142948

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.