Evidence map›Paper›PMID 34362300›Full record

ArticleBMC plant biology2021

JA signal-mediated immunity of Dendrobium catenatum to necrotrophic Southern Blight pathogen.

Cong Li, Qiuyi Shen, Xiang Cai, Danni Lai, Lingshang Wu, Zhigang Han, Tianlun Zhao, Donghong Chen, Jinping Si

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Cong Li *State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China.
Qiuyi Shen *State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China.
Xiang CaiState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China.
Danni LaiState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China.
Lingshang WuState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China.
Zhigang HanState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China.
Tianlun ZhaoCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China.
Donghong ChenState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China. donghong.chen@zafu.edu.cn.
Jinping SiState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China. lssjp@163.com.
Zhejiang A & F University · CNZhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDendrobium catenatum belongs to the Orchidaceae, and is a precious Chinese herbal medicine. In the past 20 years, D. catenatum industry has developed from an endangered medicinal plant to multi-billion dollar grade industry. The necrotrophic pathogen Sclerotium delphinii has a devastating effection on over 500 plant species, especially resulting in widespread infection and severe yield loss in the process of large-scale cultivation of D. catenatum. It has been widely reported that Jasmonate (JA) is involved in plant immunity to pathogens, but the mechanisms of JA-induced plant resistance to S. delphinii are unclear.

resultsIn the present study, the role of JA in enhancing D. catenatum resistance to S. delphinii was investigated. We identified 2 COI1, 13 JAZ, and 12 MYC proteins in D. catenatum genome. Subsequently, systematic analyses containing phylogenetic relationship, gene structure, protein domain, and motif architecture of core JA pathway proteins were conducted in D. catenatum and the newly characterized homologs from its closely related orchid species Phalaenopsis equestris and Apostasia shenzhenica, along with the well-investigated homologs from Arabidopsis thaliana and Oryza sativa. Public RNA-seq data were investigated to analyze the expression patterns of D. catenatum core JA pathway genes in various tissues and organs. Transcriptome analysis of MeJA and S. delphinii treatment showed exogenous MeJA changed most of the expression of the above genes, and several key members, including DcJAZ1/2/5 and DcMYC2b, are involved in enhancing defense ability to S. delphinii in D. catenatum.

conclusionsThe findings indicate exogenous MeJA treatment affects the expression level of DcJAZ1/2/5 and DcMYC2b, thereby enhancing D. catenatum resistance to S. delphinii. This research would be helpful for future functional identification of core JA pathway genes involved in breeding for disease resistance in D. catenatum.

Indexed as

AcetatesBasidiomycotaCyclopentanesDendrobiumDisease ResistanceGene Expression Regulation, PlantMultigene FamilyOxylipinsPhylogenyPlant DiseasesPlant ImmunityPlant ProteinsSignal TransductionAcetatesCyclopentanesjasmonic acidmethyl jasmonateOxylipinsPlant ProteinsCOI1Dendrobium catenatumJasmonateJAZMYC transcription factorSclerotium delphinii

Identifiers

PMID34362300
PMCPMC8344041
OpenAlexW3191861656

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.