Evidence map›Paper›PMID 34361735›Full record

ReviewMolecules (Basel, Switzerland)2021

Strategies and Approaches for Discovery of Small Molecule Disruptors of Biofilm Physiology.

Michael A Trebino, Rahul D Shingare, John B MacMillan, Fitnat H Yildiz

Abstract readReview
In one paragraph

Review in Molecules (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Metabolomic and Proteomic Changes inInternational journal of molecular sciences · 2022
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Michael A TrebinoDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, CA 95064, USA.ORCID 0000-0003-4577-3114
Rahul D ShingareDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, CA 95064, USA.
John B MacMillanDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, CA 95064, USA.
Fitnat H YildizDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, CA 95064, USA.

Funding

Vibrio cholerae c-diGMP signaling: Motile to biofilm transition and transmissionR01AI102584 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI YILDIZ, HAVVA FITNAT · 2013 to 2023
$6.5M
NIAID NIH HHS R01 AI102584NIH HHS R01AI102584
6 · The paper itself

Abstract

Biofilms, the predominant growth mode of microorganisms, pose a significant risk to human health. The protective biofilm matrix, typically composed of exopolysaccharides, proteins, nucleic acids, and lipids, combined with biofilm-grown bacteria's heterogenous physiology, leads to enhanced fitness and tolerance to traditional methods for treatment. There is a need to identify biofilm inhibitors using diverse approaches and targeting different stages of biofilm formation. This review discusses discovery strategies that successfully identified a wide range of inhibitors and the processes used to characterize their inhibition mechanism and further improvement. Additionally, we examine the structure-activity relationship (SAR) for some of these inhibitors to optimize inhibitor activity.

Indexed as

Anti-Bacterial AgentsBacterial ProteinsBiofilmsCyclic GMPDrug DesignDrug DiscoveryDrug Resistance, BacterialExtracellular Polymeric Substance MatrixGram-Negative BacteriaGram-Positive BacteriaLipidsMicrobial Sensitivity TestsNucleic AcidsPolysaccharides, BacterialSmall Molecule LibrariesStructure-Activity RelationshipAnti-Bacterial AgentsBacterial ProteinsCyclic GMPLipidsNucleic AcidsPolysaccharides, BacterialSmall Molecule Librariesbiofilm inhibitorsbiofilmsc-di-GMP inhibitorsinhibitor discoverystructure-activity relationship

Identifiers

PMID34361735
PMCPMC8348372

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.