Evidence map›Paper›PMID 34361703›Full record

ArticleMolecules (Basel, Switzerland)2021

Identification of Broad-Spectrum MMP Inhibitors by Virtual Screening.

Aleix Gimeno, Doretta Cuffaro, Elisa Nuti, María José Ojeda-Montes, Raúl Beltrán-Debón, Miquel Mulero, Armando Rossello, Gerard Pujadas, Santiago Garcia-Vallvé

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Aleix GimenoResearch Group in Cheminformatics & Nutrition, Departament de Bioquímica i Biotecnologia, Campus de Sescelades, Universitat Rovira i Virgili, 43007 Tarragona, Catalonia, Spain.ORCID 0000-0002-7654-6689
Doretta CuffaroDepartment of Pharmacy, University of Pisa, Via Bonanno 6, 56126 Pisa, Italy.
Elisa NutiDepartment of Pharmacy, University of Pisa, Via Bonanno 6, 56126 Pisa, Italy.ORCID 0000-0003-2669-5376
María José Ojeda-MontesResearch Group in Cheminformatics & Nutrition, Departament de Bioquímica i Biotecnologia, Campus de Sescelades, Universitat Rovira i Virgili, 43007 Tarragona, Catalonia, Spain.
Raúl Beltrán-DebónResearch Group in Cheminformatics & Nutrition, Departament de Bioquímica i Biotecnologia, Campus de Sescelades, Universitat Rovira i Virgili, 43007 Tarragona, Catalonia, Spain.ORCID 0000-0001-9691-1906
Miquel MuleroResearch Group in Cheminformatics & Nutrition, Departament de Bioquímica i Biotecnologia, Campus de Sescelades, Universitat Rovira i Virgili, 43007 Tarragona, Catalonia, Spain.ORCID 0000-0003-2545-2065
Armando RosselloDepartment of Pharmacy, University of Pisa, Via Bonanno 6, 56126 Pisa, Italy.ORCID 0000-0002-6795-8091
Gerard PujadasResearch Group in Cheminformatics & Nutrition, Departament de Bioquímica i Biotecnologia, Campus de Sescelades, Universitat Rovira i Virgili, 43007 Tarragona, Catalonia, Spain.ORCID 0000-0003-2598-8089
Santiago Garcia-VallvéResearch Group in Cheminformatics & Nutrition, Departament de Bioquímica i Biotecnologia, Campus de Sescelades, Universitat Rovira i Virgili, 43007 Tarragona, Catalonia, Spain.ORCID 0000-0002-0348-7497
Universitat Rovira i Virgili · ESUniversity of Pisa · ITInstitute for Research in Biomedicine · ES

Funding

Universitat Rovira i Virgili 2016PFR-URV-B2-67Universitat Rovira i Virgili 2017PFR-URV-B2-69University of Pisa "Fondi di Ateneo" 2019University of Pisa PRA_2020_58
6 · The paper itself

Abstract

Matrix metalloproteinases (MMPs) are the family of proteases that are mainly responsible for degrading extracellular matrix (ECM) components. In the skin, the overexpression of MMPs as a result of ultraviolet radiation triggers an imbalance in the ECM turnover in a process called photoaging, which ultimately results in skin wrinkling and premature skin ageing. Therefore, the inhibition of different enzymes of the MMP family at a topical level could have positive implications for photoaging. Considering that the MMP catalytic region is mostly conserved across different enzymes of the MMP family, in this study we aimed to design a virtual screening (VS) workflow to identify broad-spectrum MMP inhibitors that can be used to delay the development of photoaging. Our in silico approach was validated in vitro with 20 VS hits from the Specs library that were not only structurally different from one another but also from known MMP inhibitors. In this bioactivity assay, 18 of the 20 compounds inhibit at least one of the assayed MMPs at 100 μM (with 5 of them showing around 50% inhibition in all the tested MMPs at this concentration). Finally, this VS was used to identify natural products that have the potential to act as broad-spectrum MMP inhibitors and be used as a treatment for photoaging.

Indexed as

Biological ProductsCatalytic DomainEnzyme AssaysHigh-Throughput Screening AssaysHumansMatrix Metalloproteinase InhibitorsMatrix MetalloproteinasesMolecular Docking SimulationProtein BindingProtein ConformationProtein Interaction Domains and MotifsSensitivity and SpecificitySkinSkin AgingSmall Molecule LibrariesStatic ElectricityBiological ProductsMatrix Metalloproteinase InhibitorsMatrix MetalloproteinasesSmall Molecule Librariesbioactivity predictionin vitro validationnatural productsnon-selective matrix metalloproteinasesphotoagingskin treatment

Identifiers

PMID34361703
PMCPMC8347235
OpenAlexW3185105696

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.