Evidence map›Paper›PMID 34361006›Full record

ArticleInternational journal of molecular sciences2021

Direct Measurement of the Affinity between tBid and Bax in a Mitochondria-Like Membrane.

Markus Rose, Martin Kurylowicz, Mohammad Mahmood, Sheldon Winkel, Jose M Moran-Mirabal, Cécile Fradin

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Membrane Proteins: Structure, Function and Motion.International journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Markus RoseDepartment of Physics and Astronomy, McMaster University, Hamilton, ON L8S 4M1, Canada.ORCID 0000-0002-1064-7436
Martin KurylowiczDepartment of Physics and Astronomy, McMaster University, Hamilton, ON L8S 4M1, Canada.
Mohammad MahmoodDepartment of Physics and Astronomy, McMaster University, Hamilton, ON L8S 4M1, Canada.
Sheldon WinkelDepartment of Physics and Astronomy, McMaster University, Hamilton, ON L8S 4M1, Canada.
Jose M Moran-MirabalDepartment of Chemistry and Chemical Biology, McMaster University, Hamilton, ON L8S 4M1, Canada.ORCID 0000-0002-4811-3085
Cécile FradinDepartment of Physics and Astronomy, McMaster University, Hamilton, ON L8S 4M1, Canada.ORCID 0000-0001-8329-4953
McMaster University · CA

Funding

CIHR FRN86657Natural Sciences and Engineering Research Council of Canada RGPIN-2015-06362
6 · The paper itself

Abstract

The execution step in apoptosis is the permeabilization of the outer mitochondrial membrane, controlled by Bcl-2 family proteins. The physical interactions between the different proteins in this family and their relative abundance literally determine the fate of the cells. These interactions, however, are difficult to quantify, as they occur in a lipid membrane and involve proteins with multiple conformations and stoichiometries which can exist both in soluble and membrane. Here we focus on the interaction between two core Bcl-2 family members, the executor pore-forming protein Bax and the truncated form of the activator protein Bid (tBid), which we imaged at the single particle level in a mitochondria-like planar supported lipid bilayer. We inferred the conformation of the proteins from their mobility, and detected their transient interactions using a novel single particle cross-correlation analysis. We show that both tBid and Bax have at least two different conformations at the membrane, and that their affinity for one another increases by one order of magnitude (with a 2D-KD decreasing from ≃1.6μm-2 to ≃0.1μm-2) when they pass from their loosely membrane-associated to their transmembrane form. We conclude by proposing an updated molecular model for the activation of Bax by tBid.

Indexed as

Animalsbcl-2-Associated X ProteinBH3 Interacting Domain Death Agonist ProteinHumansLipid BilayersMiceProtein BindingProtein ConformationBAX protein, humanbcl-2-Associated X ProteinBH3 Interacting Domain Death Agonist ProteinBid protein, mouseLipid BilayersapoptosisBaxBcl-2 familyBidfluorescencemembrane proteinmitochondriaprotein oligomerizationprotein–protein interactionsingle particle detection

Identifiers

PMID34361006
PMCPMC8348223
OpenAlexW3193030331

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.