Evidence map›Paper›PMID 34360971›Full record

ArticleInternational journal of molecular sciences2021

Identification of an IL-22-Dependent Gene Signature as a Pharmacodynamic Biomarker.

Julie Rae, Jason Hackney, Kevin Huang, Mary Keir, Ann Herman

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Population pharmacokinetics and pharmacodynamics of efmarodocokin alfa (IL-22Fc).Journal of pharmacokinetics and pharmacodynamics · 2024
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Julie RaeOMNI Biomarker Development, Genentech Inc., 1 DNA Way, South San Francisco, CA 94080, USA.ORCID 0000-0002-7840-8570
Jason HackneyBioinformatics, Genentech Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
Kevin HuangBioinformatics, Genentech Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
Mary KeirOMNI Biomarker Discovery, Genentech Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
Ann HermanOMNI Biomarker Development, Genentech Inc., 1 DNA Way, South San Francisco, CA 94080, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interleukin-22 (IL-22) plays a role in epithelial barrier function and repair, and may provide benefits in conditions like inflammatory bowel disease. However, limited human data are available to assess the clinical effect of IL-22 administration. This study used a human intestinal cell line to identify an IL-22-dependent gene signature that could serve as a pharmacodynamic biomarker for IL-22 therapy. The response to IL-22Fc (UTTR1147A, an Fc-stabilized version of IL-22) was assessed in HT-29 cells by microarray, and the selected responsive genes were confirmed by qPCR. HT-29 cells demonstrated dose-dependent increases in STAT3 phosphorylation and multiple gene expression changes in response to UTTR1147A. Genes were selected that were upregulated by UTTR1147A, but to a lesser extent by IL-6, which also signals via STAT3. IL-1R1 was highly upregulated by UTTR1147A, and differential gene expression patterns were observed in response to IL-22Fc in the presence of IL-1β. An IL-22-dependent gene signature was identified that could serve as a pharmacodynamic biomarker in intestinal biopsies to support the clinical development of an IL-22 therapeutic. The differential gene expression pattern in the presence of IL-1β suggests that an inflammatory cytokine milieu in the disease setting could influence the clinical responses to IL-22.

Indexed as

Anti-Inflammatory AgentsBiomarkersHT29 CellsHumansImmunoglobulin GInflammatory Bowel DiseasesInterleukin-22InterleukinsReceptors, Interleukin-1Recombinant ProteinsSTAT3 Transcription FactorTranscriptomeAnti-Inflammatory AgentsBiomarkersImmunoglobulin GInterleukin-22InterleukinsReceptors, Interleukin-1Recombinant ProteinsSTAT3 protein, humanSTAT3 Transcription Factorantimicrobialepithelial repairgene expressionIBDIL-1βIL-22pharmacodynamic biomarker

Identifiers

PMID34360971
PMCPMC8347589
OpenAlexW3188418182

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.