Evidence map›Paper›PMID 34360661›Full record

ArticleInternational journal of molecular sciences2021

Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant-Microbe Interactions.

Lauren K Jabusch, Peter W Kim, Dawn Chiniquy, Zhiying Zhao, Bing Wang, Benjamin Bowen, Ashley J Kang, Yasuo Yoshikuni, Adam M Deutschbauer, Anup K Singh and 1 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Lauren K JabuschEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Peter W KimCBRN Defense and Energy Technologies, Sandia National Laboratory, Livermore, CA 94550, USA.ORCID 0000-0003-2465-0414
Dawn ChiniquyEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Zhiying ZhaoJoint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Bing WangJoint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Benjamin BowenJoint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Ashley J KangEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Yasuo YoshikuniJoint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Adam M DeutschbauerEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Anup K SinghEngineering Directorate, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA.
Trent R NorthenEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Lawrence Berkeley National Laboratory · USLawrence Livermore National Laboratory · USSandia National Laboratories California · US

Funding

U.S. Department of Energy DE-AC02-05CH11231
6 · The paper itself

Abstract

Fabricated ecosystems (EcoFABs) offer an innovative approach to in situ examination of microbial establishment patterns around plant roots using nondestructive, high-resolution microscopy. Previously high-resolution imaging was challenging because the roots were not constrained to a fixed distance from the objective. Here, we describe a new 'Imaging EcoFAB' and the use of this device to image the entire root system of growing

Indexed as

RhizosphereBrachypodiumMicrotechnologyMolecular ImagingPlant RootsPseudomonasSoil Microbiologyfluorescently-tagged bacteriaGFP-like proteinsimagingmicrofabricationmicroscopyplant–microbe interactionsrhizosphere

Identifiers

PMID34360661
PMCPMC8348081
OpenAlexW3185065771

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.