Evidence map›Paper›PMID 34359847›Full record

ArticleCells2021

The Arabidopsis Root Tip (Phospho)Proteomes at Growth-Promoting versus Growth-Repressing Conditions Reveal Novel Root Growth Regulators.

Natalia Nikonorova, Evan Murphy, Cassio Flavio Fonseca de Lima, Shanshuo Zhu, Brigitte van de Cotte, Lam Dai Vu, Daria Balcerowicz, Lanxin Li, Xiangpei Kong, Gieljan De Rop and 6 more

Open access · goldAbstract read
In one paragraph

Article in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. VIK-Mediated Auxin Signaling Regulates Lateral Root Development in Arabidopsis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  4. Article
  5. Lateral Root Initiation in Cucumber (International journal of molecular sciences · 2023
    Article
  6. Article
  7. Cell Wall Integrity Signaling in Fruit Ripening.International journal of molecular sciences · 2023
    Review
  8. Article
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 5 countries.

Natalia NikonorovaDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.ORCID 0000-0002-9587-9630
Evan MurphyDivision of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough LE12 5RD, UK.
Cassio Flavio Fonseca de LimaDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Shanshuo ZhuDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.ORCID 0000-0003-4828-5378
Brigitte van de CotteDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Lam Dai VuDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.ORCID 0000-0001-5078-7532
Daria BalcerowiczIntegrated Molecular Plant Physiology Research, Biology Department, University of Antwerp, Groenenborgerlaan 171, 2020 Antwerpen, Belgium.
Lanxin LiInstitute of Science and Technology (IST) Austria, 3400 Klosterneuburg, Austria.ORCID 0000-0002-5607-272X
Xiangpei KongThe Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao 266237, China.ORCID 0000-0002-5011-9486
Gieljan De RopDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Tom BeeckmanDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Jiří FrimlInstitute of Science and Technology (IST) Austria, 3400 Klosterneuburg, Austria.ORCID 0000-0002-8302-7596
Kris VissenbergIntegrated Molecular Plant Physiology Research, Biology Department, University of Antwerp, Groenenborgerlaan 171, 2020 Antwerpen, Belgium.
Peter C MorrisInstitute for Life and Earth Sciences, School of Energy, Geosciences, Infrastructure and Society, Heriot-Watt University, Riccarton, Edinburgh EH14 4AS, UK.
Zhaojun DingThe Key Laboratory of Plant Development and Environmental Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao 266237, China.ORCID 0000-0003-0218-5136
Ive De SmetDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.ORCID 0000-0003-4607-8893
Ghent University · BEInstitute of Science and Technology Austria · ATShandong University · CNUniversity of Antwerp · BEUniversity of Nottingham · GBHeriot-Watt University · GB

Funding

Austrian Science Fund I 3630-B25Austrian Science Fund FWF I 3630Biotechnology and Biological Sciences Research Council BB_BB/H022457/1Chinese Scholarship CouncilEuropean Union's Horizon 2020 665385Fonds Wetenschappelijk Onderzoek FWO.OPR.2019.0009.01Fonds Wetenschappelijk Onderzoek G039815N
6 · The paper itself

Abstract

Auxin plays a dual role in growth regulation and, depending on the tissue and concentration of the hormone, it can either promote or inhibit division and expansion processes in plants. Recent studies have revealed that, beyond transcriptional reprogramming, alternative auxin-controlled mechanisms regulate root growth. Here, we explored the impact of different concentrations of the synthetic auxin NAA that establish growth-promoting and -repressing conditions on the root tip proteome and phosphoproteome, generating a unique resource. From the phosphoproteome data, we pinpointed (novel) growth regulators, such as the RALF34-THE1 module. Our results, together with previously published studies, suggest that auxin, H

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsGene Expression Regulation, DevelopmentalIndoleacetic AcidsMeristemMitogen-Activated Protein Kinase KinasesNaphthaleneacetic AcidsPeptide HormonesPhosphoproteinsPhosphorylationPlant Growth RegulatorsPlant RootsProtein KinasesProtein Processing, Post-TranslationalProteome1-naphthaleneacetic acidArabidopsis ProteinsIndoleacetic AcidsMitogen-Activated Protein Kinase KinasesMKK2 protein, ArabidopsisNaphthaleneacetic AcidsPeptide HormonesPhosphoproteinsPlant Growth RegulatorsProtein KinasesProteomeProton-Translocating ATPasesralf-like 34 protein, ArabidopsisReceptors, Cell SurfaceTHESEUS1 protein, Arabidopsisauxin(phospho)proteomicsprimary root(receptor) kinase

Identifiers

PMID34359847
PMCPMC8303113
OpenAlexW3177293603

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.