Evidence map›Paper›PMID 34359285›Full record

ArticleDiagnostics (Basel, Switzerland)2021

Liquid Biopsy Is a Promising Tool for Genetic Testing in Idiopathic Pulmonary Fibrosis.

Pierlorenzo Pallante, Umberto Malapelle, Mariantonia Nacchio, Roberta Sgariglia, Domenico Galati, Ludovica Capitelli, Serena Zanotta, Mario Galgani, Erica Piemonte, Alessandro Sanduzzi Zamparelli and 2 more

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Pierlorenzo PallanteIstituto per l'Endocrinologia e l'Oncologia Sperimentale (IEOS) "G. Salvatore", Consiglio Nazionale delle Ricerche (CNR), 80131 Napoli, Italy.ORCID 0000-0001-7319-684X
Umberto MalapelleDipartimento di Sanità Pubblica, Università Federico II, 80131 Napoli, Italy.ORCID 0000-0003-3211-9957
Mariantonia NacchioDipartimento di Sanità Pubblica, Università Federico II, 80131 Napoli, Italy.
Roberta SgarigliaDipartimento di Sanità Pubblica, Università Federico II, 80131 Napoli, Italy.
Domenico GalatiDipartimento di Onco-Ematologia e Diagnostica Innovativa, Istituto Nazionale Tumori-IRCCS-Fondazione "G. Pascale", 80131 Napoli, Italy.ORCID 0000-0001-5613-9149
Ludovica CapitelliDipartimento di Medicina Clinica e Chirurgia, Università Federico II, 80131 Napoli, Italy.
Serena ZanottaDipartimento di Onco-Ematologia e Diagnostica Innovativa, Istituto Nazionale Tumori-IRCCS-Fondazione "G. Pascale", 80131 Napoli, Italy.
Mario GalganiDipartimento di Medicina Molecolare e Biotecnologie Mediche, Università Federico II, 80131 Napoli, Italy.
Erica PiemonteDipartimento di Medicina Molecolare e Biotecnologie Mediche, Università Federico II, 80131 Napoli, Italy.
Alessandro Sanduzzi ZamparelliDipartimento di Medicina Clinica e Chirurgia, Università Federico II, 80131 Napoli, Italy.
Gaetano ReaDipartimento di Radiologia, Azienda Ospedaliera dei Colli, Ospedale Monaldi, 80131 Napoli, Italy.
Marialuisa BocchinoDipartimento di Medicina Clinica e Chirurgia, Università Federico II, 80131 Napoli, Italy.
Istituto Nazionale Tumori IRCCS "Fondazione G. Pascale" · ITUniversity of Naples Federico II · ITInstitute for Experimental Endocrinology and Oncology · ITOspedale Monaldi · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Liquid biopsy, which allows the isolation of circulating cell-free (ccf) DNA from blood, is an emerging noninvasive tool widely used in oncology for diagnostic and prognosis purposes. Previous data have shown that serum cfDNA discriminates idiopathic pulmonary fibrosis (IPF) from other interstitial lung diseases. Our study aimed to measure plasma levels of ccfDNA in 59 consecutive therapy-naive and clinically stable IPF patients. The single nucleotide polymorphism (SNP) of the MUC5B gene promoter (rs35705950), associated with increased susceptibility of developing IPF, has been sought in plasma cfDNA and genomic DNA for comparison. Thirty-five age- and sex-matched healthy volunteers were recruited as the control group. Our results show that concentrations of small-size ccfDNA fragments were significantly higher in IPF patients than in controls and inversely correlated with lung function deterioration. Moreover, the median level of 104 ng/mL allowed discriminating patients with mild disease from those more advanced. The rs35705950 polymorphism was found in 11.8% of IPF patients and 8% of controls, with no differences. Complete concordance between ccfDNA and genomic DNA was detected in all control samples, while four out of seven IPF cases (57%) carrying the rs35705950 polymorphism were discordant from genomic DNA (7% of total IPF). Liquid biopsy is a suitable tool with optimistic expectations of application in the field of IPF. In analogy with cancer biology, finding some discrepancies between ccfDNA and genomic DNA in IPF patients suggests that the former may convey specific genetic information present in the primary site of the disease.

Indexed as

cell-free DNAgeneticsidiopathic pulmonary fibrosisliquid biopsyMUC5B

Identifiers

PMID34359285
PMCPMC8305941
OpenAlexW3177184311

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.