Evidence map›Paper›PMID 34356512›Full record

ArticleBiology2021

Male Differentiation in the Marine Copepod

Kevin Sugier, Romuald Laso-Jadart, Benoît Vacherie, Jos Käfer, Laurie Bertrand, Karine Labadie, Nathalie Martins, Céline Orvain, Emmanuelle Petit, Patrick Wincker and 3 more

Open access · goldAbstract read
In one paragraph

Article in Biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 56% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Kevin SugierGénomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, 91000 Evry, France.ORCID 0000-0002-9778-5179
Romuald Laso-JadartGénomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, 91000 Evry, France.ORCID 0000-0001-8410-1121
Benoît VacherieGenoscope, Institut de Biologie François-Jacob, Commissariat à l'Energie Atomique (CEA), Université Paris-Saclay, 91000 Evry, France.
Jos KäferLaboratoire de Biométrie et Biologie Evolutive UMR 5558, Université Lyon 1, Université de Lyon, 69622 Villeurbanne, France.ORCID 0000-0002-0561-8008
Laurie BertrandGénomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, 91000 Evry, France.
Karine LabadieGenoscope, Institut de Biologie François-Jacob, Commissariat à l'Energie Atomique (CEA), Université Paris-Saclay, 91000 Evry, France.ORCID 0000-0001-7467-8509
Nathalie MartinsGénomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, 91000 Evry, France.
Céline OrvainGénomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, 91000 Evry, France.
Emmanuelle PetitGenoscope, Institut de Biologie François-Jacob, Commissariat à l'Energie Atomique (CEA), Université Paris-Saclay, 91000 Evry, France.
Patrick WinckerGénomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, 91000 Evry, France.ORCID 0000-0001-7562-3454
Jean-Louis JametMediterranean Institute of Oceanography, Université de Toulon, Aix-Marseille Université, CEDEX 9, 83041 Toulon, France.ORCID 0000-0002-2296-6231
Adriana AlbertiGénomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, 91000 Evry, France.ORCID 0000-0003-3372-9423
Mohammed-Amin MadouiGénomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, 91000 Evry, France.ORCID 0000-0003-4809-2971
Université Paris-Saclay · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRUniversité Claude Bernard Lyon 1 · FRUniversité de Toulon · FR

Funding

Agence Nationale de la Recherche ANR-10-INBS-09
6 · The paper itself

Abstract

Copepods are among the most numerous animals, and they play an essential role in the marine trophic web and biogeochemical cycles. The genus Oithona is described as having the highest density of copepods. The Oithona male paradox describes the activity states of males, which are obliged to alternate between immobile and mobile phases for ambush feeding and mate searching, respectively, while the female is less mobile and feeds less. To characterize the molecular basis of this sexual dimorphism, we combined immunofluorescence, genomics, transcriptomics, and protein-protein interaction approaches and revealed the presence of a male-specific nervous ganglion. Transcriptomic analysis showed male-specific enrichment for nervous system development-related transcripts. Twenty-seven Lin12-Notch Repeat domain-containing protein coding genes (LDPGs) of the 75 LDPGs identified in the genome were specifically expressed in males. Furthermore, some LDPGs coded for proteins with predicted proteolytic activity, and proteases-associated transcripts showed a male-specific enrichment. Using yeast double-hybrid assays, we constructed a protein-protein interaction network involving two LDPs with proteases, extracellular matrix proteins, and neurogenesis-related proteins. We also hypothesized possible roles of the LDPGs in the development of the lateral ganglia through helping in extracellular matrix lysis, neurites growth guidance, and synapses genesis.

Indexed as

copepodsLin12-Notch-Repeatnervous systemOithonaprotein–protein interactionsexual differentiation

Identifiers

PMID34356512
PMCPMC8301441
OpenAlexW3180432372

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.