Evidence map›Paper›PMID 34356057›Full record

ArticleGenes2021

Bioinformatics Analysis of Allele Frequencies and Expression Patterns of ACE2, TMPRSS2 and FURIN in Different Populations and Susceptibility to SARS-CoV-2.

Mohammad Tarek, Hana Abdelzaher, Firas Kobeissy, Hassan A N El-Fawal, Mohammed M Salama, Anwar Abdelnaser

Open access · goldAbstract read
In one paragraph

Article in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Measuring the Possibility of Middle Ear Discharge for COVID-19 Test Material.Interdisciplinary perspectives on infectious diseases · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Mohammad TarekBioinformatics Department, Armed Forces College of Medicine, Cairo 12622, Egypt.ORCID 0000-0003-4244-3320
Hana AbdelzaherInstitute of Global Health and Human Ecology, School of Science and Engineering, The American University in Cairo, Cairo 12622, Egypt.ORCID 0000-0001-8386-5103
Firas KobeissyDepartment of Emergency Medicine, McKnight Brain Institute, University of Florida, Gainesville, FL 32610, USA.ORCID 0000-0002-5008-6944
Hassan A N El-FawalInstitute of Global Health and Human Ecology, School of Science and Engineering, The American University in Cairo, Cairo 12622, Egypt.
Mohammed M SalamaInstitute of Global Health and Human Ecology, School of Science and Engineering, The American University in Cairo, Cairo 12622, Egypt.
Anwar AbdelnaserInstitute of Global Health and Human Ecology, School of Science and Engineering, The American University in Cairo, Cairo 12622, Egypt.ORCID 0000-0003-0088-6799
American University in Cairo · EGArmed Forces College of Medicine · EGUniversity of Florida · US

Funding

CSRD VA 1
6 · The paper itself

Abstract

The virus responsible for the COVID-19 global health crisis, SARS-CoV-2, has been shown to utilize the ACE2 protein as an entry point to its target cells. The virus has been shown to rely on the actions of TMPRSS2 (a serine protease), as well as FURIN (a peptidase), for the critical priming of its spike protein. It has been postulated that variations in the sequence and expression of SARS-CoV-2's receptor (ACE2) and the two priming proteases (TMPRSS2 and FURIN) may be critical in contributing to SARS-CoV-2 infectivity. This study aims to examine the different expression levels of FURIN in various tissues and age ranges in light of ACE2 and TMPRSS2 expression levels using the LungMAP database. Furthermore, we retrieved expression quantitative trait loci (eQTLs) of the three genes and their annotation. We analyzed the frequency of the retrieved variants in data from various populations and compared it to the Egyptian population. We highlight FURIN's potential interplay with the immune response to SARS-CoV-2 and showcase a myriad of variants of the three genes that are differentially expressed across populations. Our findings provide insights into potential genetic factors that impact SARS-CoV-2 infectivity in different populations and shed light on the varying expression patterns of FURIN.

Indexed as

AllelesAngiotensin-Converting Enzyme 2COVID-19Databases, Nucleic AcidFurinGene Expression Regulation, EnzymologicGene FrequencyGenetic Predisposition to DiseaseSerine EndopeptidasesComputational BiologyFemaleHumansMaleSARS-CoV-2ACE2 protein, humanAngiotensin-Converting Enzyme 2FurinFURIN protein, humanSerine EndopeptidasesTMPRSS2 protein, humanACE2COVID-19eQTLsFURINSARS-CoV-2TMPRSS2variants

Identifiers

PMID34356057
PMCPMC8303858
OpenAlexW3178000899

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.