Evidence map›Paper›PMID 34355883›Full record

ArticleACS chemical biology2021

Validation of Trifluoromethylphenyl Diazirine Cholesterol Analogues As Cholesterol Mimetics and Photolabeling Reagents.

Kathiresan Krishnan, Mingxing Qian, McKenna Feltes, Zi-Wei Chen, Sarah Gale, Lei Wang, Yusuke Sugasawa, David E Reichert, Jean E Schaffer, Daniel S Ory and 2 more

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Kathiresan Krishnan
Mingxing Qian
McKenna Feltes
Zi-Wei Chen
Sarah Gale
Lei Wang
Yusuke Sugasawa
Jean E Schaffer
Daniel S Ory
Washington University in St. Louis · US

Funding

Post-lysosomal cholesterol trafficking networksR01HL067773 · NHLBI · WASHINGTON UNIVERSITY · PI SCHAFFER, JEAN E. · 2002 to 2021
$6.3M
MOLECULAR SITES OF NEUROSTEROID BINDINGR01GM108799 · NIGMS · WASHINGTON UNIVERSITY · PI EVERS, ALEX S. · 2014 to 2022
$4.0M
Development of chemical biology tools for NMDA receptorsR01MH110550 · NIMH · WASHINGTON UNIVERSITY · PI COVEY, DOUGLAS F · 2017 to 2021
$2.0M
Training in Integrative and Systems Biology of Cardiovascular DiseaseT32HL134635 · NHLBI · WASHINGTON UNIVERSITY · PI NERBONNE, JEANNE M. · 2017 to 2021
$1.8M
Post-lysosomal Cholesterol Trafficking: Elucidating protein networks using diazirine alkyne probesF31HL142167 · NHLBI · WASHINGTON UNIVERSITY · PI FELTES, MCKENNA RAE · 2018 to 2019
$55k
NHLBI NIH HHS F31 HL142167NHLBI NIH HHS R01 HL067773NHLBI NIH HHS T32 HL134635NIGMS NIH HHS R01 GM108799NIMH NIH HHS R01 MH110550
6 · The paper itself

Abstract

Aliphatic diazirine analogues of cholesterol have been used previously to elaborate the cholesterol proteome and identify cholesterol binding sites on proteins. Cholesterol analogues containing the trifluoromethylphenyl diazirine (TPD) group have not been reported. Both classes of diazirines have been prepared for neurosteroid photolabeling studies and their combined use provided information that was not obtainable with either diazirine class alone. Hence, we prepared cholesterol TPD analogues and used them along with previously reported aliphatic diazirine analogues as photoaffinity labeling reagents to obtain additional information on the cholesterol binding sites of the pentameric

Indexed as

AlkynesBinding SitesCholesterolCyanobacteriaDiazomethaneFluorescent DyesLigand-Gated Ion ChannelsMolecular Docking SimulationMolecular Dynamics SimulationPhotoaffinity LabelsProtein BindingAlkynesCholesterolDiazomethaneFluorescent DyesLigand-Gated Ion ChannelsPhotoaffinity Labels

Identifiers

PMID34355883
PMCPMC8740335
OpenAlexW3187317782

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.