Evidence map›Paper›PMID 34355117›Full record

ArticleNanoscale advances2021

A mini DNA-RNA hybrid origami nanobrick.

Lifeng Zhou, Arun Richard Chandrasekaran, Mengwen Yan, Vibhav A Valsangkar, Jeremy I Feldblyum, Jia Sheng, Ken Halvorsen

Open access · goldAbstract read
In one paragraph

Article in Nanoscale advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Switchback RNA.ACS chemical biology · 2024
    Article
  6. Folding molecular origami from ribosomal RNA.Journal of nanobiotechnology · 2024
    Article
  7. Article
  8. Article
  9. 3D RNA-scaffolded wireframe origami.Nature communications · 2023
    Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Lifeng ZhouThe RNA Institute, University at Albany, State University of New York Albany NY, USA lzhou2@albany.edu.ORCID https://orcid.org/0000-0001-5479-3681
Arun Richard ChandrasekaranThe RNA Institute, University at Albany, State University of New York Albany NY, USA lzhou2@albany.edu.ORCID https://orcid.org/0000-0001-6757-5464
Mengwen YanDepartment of Chemistry, University at Albany, State University of New York Albany NY USA.ORCID https://orcid.org/0000-0001-7392-9134
Vibhav A ValsangkarThe RNA Institute, University at Albany, State University of New York Albany NY, USA lzhou2@albany.edu.ORCID https://orcid.org/0000-0002-0342-6125
Jeremy I FeldblyumDepartment of Chemistry, University at Albany, State University of New York Albany NY USA.ORCID https://orcid.org/0000-0001-6667-9587
Jia ShengThe RNA Institute, University at Albany, State University of New York Albany NY, USA lzhou2@albany.edu.ORCID https://orcid.org/0000-0001-6198-390X
Ken HalvorsenThe RNA Institute, University at Albany, State University of New York Albany NY, USA lzhou2@albany.edu.ORCID https://orcid.org/0000-0002-2578-1339
Albany State University · US

Funding

Manipulating nucleic acids: applications in RNA biosensing, single-molecule analysis, and DNA nanotechnologyR35GM124720 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI Ken A Halvorsen · 2017 to 2026
$4.6M
Environmental Epitranscriptomic Studies and Tools Focused on the Wobble UridineR15GM124627 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI SHENG, JIA · 2017 to 2017
$443k
NIGMS NIH HHS R15 GM124627NIGMS NIH HHS R35 GM124720
6 · The paper itself

Abstract

DNA origami is typically used to fold a long single-stranded DNA scaffold into nanostructures with complex geometries using many short DNA staple strands. Integration of RNA into nucleic acid nanostructures is also possible, but has been less studied. In this research, we designed and characterized a hybrid RNA-scaffolded origami nanostructure with dimensions of ∼12 nm. We used 12 DNA staple strands to fold a 401 nt RNA scaffold into a ten-helix bundle with a honeycomb cross section. We verified the construction of the nanostructure using gel electrophoresis and atomic force microscopy. The DNA-RNA hybrid origami showed higher resistance to ribonuclease compared to a DNA-RNA duplex control. Our work shows potential use in folding long RNA, such as messenger RNA, into origami nanostructures that can be delivered into targeted cells as medicine or a vaccine.

Identifiers

PMID34355117
PMCPMC8276786
OpenAlexW3172114982

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.