Evidence map›Paper›PMID 34354398›Full record

ArticleSaudi journal of biological sciences2021

Frequency distribution and association of Fat-mass and obesity (FTO) gene SNP rs-9939609 variant with Diabetes Mellitus Type-II population of Hyderabad, Sindh, Pakistan.

Farheen Shaikh, Tazeen Shah, Norah Abdullah Bazekh Madkhali, Ahmed Gaber, Walaa F Alsanie, Sanum Ali, Shafaq Ansari, Muhammad Rafiq, R Z Sayyed, Nadir Ali Rind and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Saudi journal of biological sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

  1. Genetic Variants ofGenes · 2023
    Article
  2. Minor alleles ofFrontiers in endocrinology · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 3 countries.

Farheen ShaikhDepartment of Biochemistry, Peoples University of Medical and Health Sciences for Women, Shaheed Benazir Abad, Sindh, Pakistan.
Tazeen ShahDepartment of Physiology, Liaquat University of Medical and Health Sciences, Jamshoro, (LUMHS) Sindh, Pakistan.
Norah Abdullah Bazekh MadkhaliCollege of Nursing, Jazan University, Jazan, Saudi Arabia.
Ahmed GaberDepartment of Biology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia.
Walaa F AlsanieCenter of Biomedical Sciences Research (CBSR), Taif University, P.O. Box, 11099, Taif 21944, Saudi Arabia.
Sanum AliDepartment of Anatomy, Basic Medical Sciences Institute (BMSI), Jinnah Postgraduate Medical Centre, Karachi, Pakistan.
Shafaq AnsariDepartment of Physiology, Muhammad Medical College, Mirpurkhas, Sindh, Pakistan.
Muhammad RafiqInstitute of Biotechnology and Genetic Engineering, University of Sindh, Jamshoro 76080, Sindh, Pakistan.
R Z SayyedAsian PGPR Society for Sustainable Agriculture, Auburn University, Auburn, AL 36830, USA.
Nadir Ali RindDepartment of Molecular Biology and Genetics, Shaheed Benazir Bhutto University, Shaheed Benazirabad, Sindh, Pakistan.
Khalid Hussain RindDepartment of Molecular Biology and Genetics, Shaheed Benazir Bhutto University, Shaheed Benazirabad, Sindh, Pakistan.
Akhtar Hussain SharDepartment of Molecular Biology and Genetics, Shaheed Benazir Bhutto University, Shaheed Benazirabad, Sindh, Pakistan.
Syed Mohammed Basheeruddin AsdaqDepartment of Pharmacy Practice, College of Pharmacy, AlMaarefa University, Dariyah, 13713, Riyadh, Saudi Arabia.
Shaheed Benazir Bhutto University · PKTaif University · SAAlmaarefa UniversityAuburn University · USJazan University · SAJinnah Postgraduate Medical Center · PKLiaquat University of Medical & Health Sciences · PKUniversity of Sindh · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND/

aimDiabetes Mellitus (DM) is one of the important public health issues worldwide. The Fat mass obesity (FTO) gene rs-9939609 variant identified single nucleotide polymorphism (SNP) with the T to A missense mutation, and has a strong association with T2DM. FTO gene is present on chromosome "16q12.2" comprising of nine exons. FTO gene rs-9939609 a variant is commonly found in the Pakistani Population. The purpose of the study was to alert the population about the rs-9939609 variant SNP, having a strong association with T2DM. MATERIAL AND

methodsTotal of 190 participants were included in the present cross-sectional study. To collect the samples non-probability convenience technique was used. subjects were recruited and divided into three groups, normal healthy subjects, obese and T2DM. The patients were selected from the Medicine department Jamshoro/Hyderabad by filling the pre-designed proforma, as well as verbal and written consent taken from study participants. To analysed the data ANOVA Post hoc (Tukey-test) was applied for comparison among groups (P < 0.05) and "SNP-STAT" online software was used for frequencies.

resultsThe BMI, neck circumference, waist circumference and lipid profile, fasting blood sugar and HbA1c was found significant (p < 0.001) in both genders as compared to control. Homozygous and heterozygous distribution of allelic and genotyping frequency was found in study participants. 37.9 %T/A, 57.4% T/T, and A/A were 4.7%. The FTO gene rs-9939609 variant amplified and have an increased risk of developing T2DM in the Sindh population. Codominant model odd ratio of T/A showed 2.42 (

conclusionThe present study concluded that the

Indexed as

BMIFTO geneObesitySNPT2DM

Identifiers

PMID34354398
PMCPMC8325002
OpenAlexW3167797819

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.