Evidence map›Paper›PMID 34354117›Full record

ArticleScientific reports2021

Antimicrobial susceptibilities and comparative whole genome analysis of two isolates of the probiotic bacterium Lactiplantibacillus plantarum, strain ATCC 202195.

Lisa G Pell, Rachael G Horne, Stuart Huntley, Hafizur Rahman, Sanchita Kar, Mohammad Shahidul Islam, Kara C Evans, Samir K Saha, Aaron Campigotto, Shaun K Morris and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Lisa G Pell *Centre for Global Child Health, Hospital for Sick Children, Toronto, ON, Canada.
Rachael G Horne *Cell Biology Program, Research Institute, Hospital for Sick Children, Toronto, ON, Canada.
Stuart HuntleyInternational Flavors & Fragrances Inc., Madison, WI, USA.
Hafizur RahmanChild Health Research Foundation, Dhaka, Bangladesh.
Sanchita KarChild Health Research Foundation, Dhaka, Bangladesh.
Mohammad Shahidul IslamChild Health Research Foundation, Dhaka, Bangladesh.
Kara C EvansInternational Flavors & Fragrances Inc., Madison, WI, USA.
Samir K SahaChild Health Research Foundation, Dhaka, Bangladesh.
Aaron CampigottoDepartment of Paediatrics, Faculty of Medicine, University of Toronto, Toronto, ON, Canada.
Shaun K MorrisCentre for Global Child Health, Hospital for Sick Children, Toronto, ON, Canada.
Daniel E RothCentre for Global Child Health, Hospital for Sick Children, Toronto, ON, Canada. daniel.roth@sickkids.ca.
Philip M ShermanCell Biology Program, Research Institute, Hospital for Sick Children, Toronto, ON, Canada. philip.sherman@sickkids.ca.
Child Health Research Foundation · BDHospital for Sick Children · CAInternational Flavors & Fragrances (United States) · USUniversity of Toronto · CASickKids Foundation · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A synbiotic containing Lactiplantibacillus plantarum [American Type Culture Collection (ATCC) strain identifier 202195] and fructooligosaccharide was reported to reduce the risk of sepsis in young infants in rural India. Here, the whole genome of two isolates of L. plantarum ATCC 202195, which were deposited to the ATCC approximately 20 years apart, were sequenced and analyzed to verify their taxonomic and strain-level identities, identify potential antimicrobial resistant genes and virulence factors, and identify genetic characteristics that may explain the observed clinical effects of L. plantarum ATCC 202195. Minimum inhibitory concentrations for selected antimicrobial agents were determined using broth dilution and gradient strip diffusion techniques. The two L. plantarum ATCC 202195 isolates were genetically identical with only three high-quality single nucleotides polymorphisms identified, and with an average nucleotide identity of 99.99%. In contrast to previously published reports, this study determined that each isolate contained two putative plasmids. No concerning acquired or transferable antimicrobial resistance genes or virulence factors were identified. Both isolates were sensitive to several clinically important antibiotics including penicillin, ampicillin and gentamicin, but resistant to vancomycin. Genes involved in stress response, cellular adhesion, carbohydrate metabolism and vitamin biosynthesis are consistent with features of probiotic organisms.

Indexed as

Anti-Bacterial AgentsGenome, BacterialGenomicsIndiaLactiplantibacillus plantarumMicrobial Sensitivity TestsPlasmidsProbioticsSynbioticsVirulence FactorsAnti-Bacterial AgentsVirulence Factors

Identifiers

PMID34354117
PMCPMC8342526
OpenAlexW3190345717

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.