Evidence map›Paper›PMID 34353876›Full record

ArticleJournal of clinical pathology2022

Proteomic characterisations of ulcerative colitis endoscopic biopsies associate with clinically relevant histological measurements of disease severity.

Aaron M Gruver, Matt D Westfall, Bradley L Ackermann, Salisha Hill, Ryan D Morrison, Juraj Bodo, Keith K Lai, David C Gemperline, Eric D Hsi, Daniel C Liebler and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of clinical pathology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Aaron M GruverLilly Research Laboratories, Eli Lilly and Company, Indianapolis, Indiana, USA gruver_aaron_m@lilly.com.ORCID http://orcid.org/0000-0001-7735-3320
Matt D WestfallProtypia, Inc, Nashville, Tennessee, USA.
Bradley L AckermannLilly Research Laboratories, Eli Lilly and Company, Indianapolis, Indiana, USA.
Salisha HillProtypia, Inc, Nashville, Tennessee, USA.
Ryan D MorrisonProtypia, Inc, Nashville, Tennessee, USA.
Juraj BodoDepartment of Laboratory Medicine, Cleveland Clinic, Cleveland, Ohio, USA.
Keith K LaiDepartment of Laboratory Medicine, Cleveland Clinic, Cleveland, Ohio, USA.
David C GemperlineLilly Research Laboratories, Eli Lilly and Company, Indianapolis, Indiana, USA.
Eric D HsiDepartment of Laboratory Medicine, Cleveland Clinic, Cleveland, Ohio, USA.
Daniel C LieblerProtypia, Inc, Nashville, Tennessee, USA.
Jochen SchmitzLilly Research Laboratories, Eli Lilly and Company, Indianapolis, Indiana, USA.
Robert J BenschopLilly Research Laboratories, Eli Lilly and Company, Indianapolis, Indiana, USA.
Eli Lilly (United States) · USCleveland Clinic · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

AIMS AND

methodsAccurate protein measurements using formalin-fixed biopsies are needed to improve disease characterisation. This feasibility study used targeted and global mass spectrometry (MS) to interrogate a spectrum of disease severities using 19 ulcerative colitis (UC) biopsies.

resultsTargeted assays for CD8, CD19, CD132 (interleukin-2 receptor subunit gamma/common cytokine receptor gamma chain), FOXP3 (forkhead box P3) and IL17RA (interleukin 17 receptor A) were successful; however, assays for IL17A (interleukin 17A), IL23 (p19) (interleukin 23, alpha subunit p19) and IL23R (interleukin 23 receptor) did not permit target detection. Global proteome analysis (4200 total proteins) was performed to identify pathways associated with UC progression. Positive correlation was observed between histological scores indicating active colitis and neutrophil-related measurements (R

conclusionsPathologist-guided MS assessments provide a complementary approach to histological scoring systems. Additional studies are indicated to verify the utility of this novel approach.

Indexed as

Colitis, UlcerativeBiopsyColonoscopyHumansInterleukin-23Intestinal MucosaProteomicsSeverity of Illness IndexInterleukin-23colitisinflammatory bowel diseasesproteins

Identifiers

PMID34353876
PMCPMC9411881
OpenAlexW3187641291

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.