Evidence map›Paper›PMID 34350474›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021

Pyramiding of scald resistance genes in four spring barley MAGIC populations.

Juho Hautsalo, Fluturë Novakazi, Marja Jalli, Magnus Göransson, Outi Manninen, Mika Isolahti, Lars Reitan, Stein Bergersen, Lene Krusell, Charlotte Damsgård Robertsen and 5 more

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 4 countries.

Juho HautsaloNatural Resources Institute Finland (Luke), Survontie 9, 40500, Jyväskylä, Finland.ORCID http://orcid.org/0000-0003-2501-2297
Fluturë NovakaziDepartment of Plant Breeding, Swedish University of Agricultural Sciences, P.O. Box 190, 234 22, Lomma, Sweden.ORCID http://orcid.org/0000-0001-7151-6811
Marja JalliNatural Resources Institute Finland (Luke), Tietotie 4, 31600, Jokioinen, Finland.
Magnus GöranssonFaculty of Land and Animal Resources, The Agricultural University of Iceland, Hvanneyri, 311, Borgarnes, Iceland.ORCID http://orcid.org/0000-0002-0081-2207
Outi ManninenBoreal Plant Breeding Ltd., Myllytie 10, 31600, Jokioinen, Norway.ORCID http://orcid.org/0000-0001-9641-6657
Mika IsolahtiBoreal Plant Breeding Ltd., Myllytie 10, 31600, Jokioinen, Norway.
Lars ReitanGraminor Ltd. Hommelstadvegen 60, 2322, Ridabu, Norway.
Stein BergersenGraminor Ltd. Hommelstadvegen 60, 2322, Ridabu, Norway.
Lene KrusellSejet Plant Breeding, Nørremarksvej 67, 8700, Horsens, Norway.
Charlotte Damsgård RobertsenSejet Plant Breeding, Nørremarksvej 67, 8700, Horsens, Norway.
Jihad OrabiNordic Seed A/S, Kornmarken 1, 8464, Galten, Denmark.
Jens Due JensenNordic Seed A/S, Kornmarken 1, 8464, Galten, Denmark.
Ahmed JahoorDepartment of Plant Breeding, Swedish University of Agricultural Sciences, P.O. Box 190, 234 22, Lomma, Sweden.
Therése BengtssonDepartment of Plant Breeding, Swedish University of Agricultural Sciences, P.O. Box 190, 234 22, Lomma, Sweden. therese.bengtsson@slu.se.ORCID http://orcid.org/0000-0003-4784-1723
PPP Barley Consortium
Swedish University of Agricultural Sciences · SEGraminor (Norway) · NONatural Resources Institute Finland · FIAgricultural University of Iceland · IS

Funding

Nordisk Ministerråd PPP-1802, PPP-1502
6 · The paper itself

Abstract

Genome-Wide Association Studies (GWAS) of four Multi-parent Advanced Generation Inter-Cross (MAGIC) populations identified nine regions on chromosomes 1H, 3H, 4H, 5H, 6H and 7H associated with resistance against barley scald disease. Three of these regions are putatively novel resistance Quantitative Trait Loci (QTL). Barley scald is caused by Rhynchosporium commune, one of the most important barley leaf diseases that are prevalent in most barley-growing regions. Up to 40% yield losses can occur in susceptible barley cultivars. Four MAGIC populations were generated in a Nordic Public-Private Pre-breeding of spring barley project (PPP Barley) to introduce resistance to several important diseases. Here, these MAGIC populations consisting of six to eight founders each were tested for scald resistance in field trials in Finland and Iceland. Eight different model covariate combinations were compared for GWAS studies, and the models that deviated the least from the expected p-values were selected. For all QTL, candidate genes were identified that are predicted to be involved in pathogen defence. The MAGIC progenies contained new haplotypes of significant SNP-markers with high resistance levels. The lines with successfully pyramided resistance against scald and mildew and the significant markers are now distributed among Nordic plant breeders and will benefit development of disease-resistant cultivars.

Indexed as

Quantitative Trait LociAscomycotaChromosome MappingDisease ResistanceFinlandGenetic Association StudiesGenotypeHaplotypesHordeumIcelandModels, GeneticPhenotypePlant BreedingPlant DiseasesPolymorphism, Single NucleotideBLINKFarmCPUGWASHordeum vulgare L.Multi-parent Advanced Generation Inter-CrossRhynchosporium commune

Identifiers

PMID34350474
PMCPMC8580920
OpenAlexW3192073240

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.