Evidence map›Paper›PMID 34349937›Full record

ArticleChemical science2021

Photocleavable proteins that undergo fast and efficient dissociation.

Xiaocen Lu, Yurong Wen, Shuce Zhang, Wei Zhang, Yilun Chen, Yi Shen, M Joanne Lemieux, Robert E Campbell

Abstract read
In one paragraph

Article in Chemical science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Traceless Regulation of Genetic Circuitry.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  4. Review
  5. Photocleavable Systems for Cell Biology: Conceptual Design across Molecular Modalities.Chembiochem : a European journal of chemical biology · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xiaocen LuDepartment of Chemistry, University of Alberta Edmonton Alberta T6G 2G2 Canada robert.e.campbell@ualberta.ca.ORCID https://orcid.org/0000-0002-8269-3837
Yurong WenDepartment of Biochemistry, University of Alberta Edmonton Alberta T6G 2H7 Canada.ORCID https://orcid.org/0000-0001-8730-5197
Shuce ZhangDepartment of Chemistry, University of Alberta Edmonton Alberta T6G 2G2 Canada robert.e.campbell@ualberta.ca.ORCID https://orcid.org/0000-0001-5238-2918
Wei ZhangDepartment of Chemistry, University of Alberta Edmonton Alberta T6G 2G2 Canada robert.e.campbell@ualberta.ca.
Yilun ChenDepartment of Biochemistry, University of Alberta Edmonton Alberta T6G 2H7 Canada.
Yi ShenDepartment of Chemistry, University of Alberta Edmonton Alberta T6G 2G2 Canada robert.e.campbell@ualberta.ca.ORCID https://orcid.org/0000-0003-4117-0279
M Joanne LemieuxDepartment of Biochemistry, University of Alberta Edmonton Alberta T6G 2H7 Canada.ORCID https://orcid.org/0000-0003-4745-9153
Robert E CampbellDepartment of Chemistry, University of Alberta Edmonton Alberta T6G 2G2 Canada robert.e.campbell@ualberta.ca.ORCID https://orcid.org/0000-0003-0604-092X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Photocleavable molecules can enable the light-dependent modulation of biomolecular activities with high spatiotemporal precision. We have previously reported a photocleavable protein (PhoCl1) that, uniquely, is a fully genetically encoded photocleavable molecule that can be introduced into cells in the form of its corresponding gene to enable optogenetic control of biomolecular activities. However, the first generation PhoCl1 exhibited a relatively slow rate of dissociation, potentially limiting its utility. Here, we report the X-ray crystal structures of the PhoCl1 green state, red state, and cleaved empty barrel. Molecular dynamics (MD) simulations were performed to provide insight into the precise dissociation mechanism. Using structure-guided engineering and directed evolution, we have developed PhoCl2c with higher contrast ratio and PhoCl2f with faster dissociation. We characterized the performance of these new variants as purified proteins and in cultured cells. Our results demonstrate that PhoCl2 variants exhibit faster and more efficient dissociation, which should enable improved optogenetic manipulations of protein localization and protein-protein interactions in living cells.

Identifiers

PMID34349937
PMCPMC8293800

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.