Evidence map›Paper›PMID 34344887›Full record

ArticleNature communications2021

Haploinsufficiency of SF3B2 causes craniofacial microsomia.

Andrew T Timberlake, Casey Griffin, Carrie L Heike, Anne V Hing, Michael L Cunningham, David Chitayat, Mark R Davis, Soghra J Doust, Amelia F Drake, Milagros M Duenas-Roque and 20 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 1 pooled it
10.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 1 synthesis or guideline pooled it, 86 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Familial Oculoauriculovertebral Spectrum: A Genomic Investigation of Autosomal Dominant Inheritance.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2026
    Article
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  15. Article
  16. Bone and Cartilage Staining for Skeletal Preparations.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  17. Article
  18. Splicing Defects and Cell Death CauseJournal of dental research · 2025
    Article
  19. Article
  20. CommonGenome research · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 17 institutions in 5 countries.

Andrew T TimberlakeHansjorg Wyss Department of Plastic and Reconstructive Surgery, NYU Langone Medical Center, New York, NY, USA. andrew.timberlake@nyumc.org.ORCID 0000-0002-8926-9692
Casey GriffinDepartment of Molecular Pathobiology, New York University College of Dentistry, New York, NY, USA.
Carrie L HeikeDepartment of Pediatrics, Division of Craniofacial Medicine, University of Washington, Seattle, WA, USA.ORCID 0000-0003-2178-7730
Anne V HingDepartment of Pediatrics, Division of Craniofacial Medicine, University of Washington, Seattle, WA, USA.
Michael L CunninghamDepartment of Pediatrics, Division of Craniofacial Medicine, University of Washington, Seattle, WA, USA.
David ChitayatDivision of Clinical and Metabolic Genetics, Department of Pediatrics, The Hospital for Sick Children, University of Toronto, Toronto, ON, Canada.
Mark R DavisDepartment of Diagnostic Genomics, Path West Laboratory Medicine, QEII Medical Centre, Hospital Avenue, Nedlands, WA, Australia.
Soghra J DoustGenetics Program, Peterborough Regional Health Centre, Peterborough, ON, Canada.
Amelia F DrakeDepartment of Otolaryngology/Head and Neck Surgery, University of North Carolina, Chapel Hill, NC, USA.
Milagros M Duenas-RoqueHospital Edgardo Rebagliati Martins, EsSalud, Lima, Peru.ORCID 0000-0001-8366-8740
Jack GoldblattGenetic Services of Western Australia, King Edward Memorial Hospital, Perth, WA, Australia.
Jonas A GustafsonDepartment of Pediatrics, Division of Craniofacial Medicine, University of Washington, Seattle, WA, USA.ORCID 0000-0002-5748-905X
Paula Hurtado-VillaPontificia Universidad Javeriana and Centro Médico Imbanaco, Cali, Colombia.
Alexis JohnsDivision of Plastic and Maxillofacial Surgery, Children's Hospital Los Angeles, Los Angeles, CA, USA.
Natalya KarpDepartment of Pediatrics, London Health Sciences Centre, Division of Medical Genetics, Western University, London, ON, Canada.
Nigel G LaingNeurogenetic Diseases Group, Harry Perkins Institute of Medical Research and Centre for Medical Research, University of Western Australia, Nedlands, WA, Australia.
Leanne MageeDivision of Plastic and Reconstructive Surgery, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
University of Washington Center for Mendelian Genomics
Sureni V MullegamaGeneDx, Gaithersburg, MD, USA.
Harry PachajoaUniversidad Icesi and Fundacion Clinica Valle del Lili, Cali, Colombia.
Gloria L Porras-HurtadoClinica Comfamiliar Risaralda, Pereira, Colombia.
Rhonda E SchnurGeneDx, Gaithersburg, MD, USA.
Jennie SleeGenetic Services of Western Australia, King Edward Memorial Hospital, Perth, WA, Australia.
Steven L SingerPerth Children's Hospital, Nedlands, WA, Australia.
David A StaffenbergHansjorg Wyss Department of Plastic and Reconstructive Surgery, NYU Langone Medical Center, New York, NY, USA.
Andrew E TimmsCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, USA.
Cheryl A WiseDepartment of Diagnostic Genomics, Path West Laboratory Medicine, QEII Medical Centre, Hospital Avenue, Nedlands, WA, Australia.
Ignacio ZaranteHuman Genomics Institute, Pontificia Universidad Javeriana, Bogotá, Colombia.ORCID 0000-0002-0729-6866
Jean-Pierre Saint-JeannetDepartment of Molecular Pathobiology, New York University College of Dentistry, New York, NY, USA.
Daniela V LuquettiDepartment of Pediatrics, Division of Craniofacial Medicine, University of Washington, Seattle, WA, USA. luquetti@uw.edu.
Seattle Children's Hospital · USKing Edward Memorial Hospital · AUNew York University · USNYU Langone Health · USPontificia Universidad Javeriana · COQueen Elizabeth II Medical Centre · AUChildren's Hospital of Los Angeles · USChildren's Hospital of Philadelphia · USCooper Medical School of Rowan University · USHospital Nacional Cayetano Heredia · PEIcesi University · COMount Sinai Hospital · CAPrincess Margaret Hospital for Children · AUThe University of Western Australia · AUUniversity of North Carolina at Chapel Hill · USUniversity of Washington · USWestern University · CA

Funding

UW Center for Mendelian GenomicsUM1HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, LEAL, SUZANNE M · 2016 to 2020
$15.3M
NHGRI Genome Sequencing Program Coordinating CenterU24HG008956 · NHGRI · RUTGERS, THE STATE UNIV OF N.J. · PI BUYSKE, STEVEN G, MATISE, TARA C. · 2016 to 2020
$4.9M
Craniofacial Microsomia: Genetic Causes and Pathway DiscoveryU01DE025862 · NIDCR · SEATTLE CHILDREN'S HOSPITAL · PI HEIKE, CARRIE LYN · 2017 to 2021
$3.0M
Pathogenesis of craniofacial defects in Nager syndromeR01DE025468 · NIDCR · NEW YORK UNIVERSITY · PI SAINT-JEANNET, JEAN-PIERRE · 2016 to 2020
$2.0M
Planning Grant for Genome-Wide Association Study of Craniofacial MicrosomiaRC1DE020270 · NIDCR · SEATTLE CHILDREN'S HOSPITAL · PI HEIKE, CARRIE LYN, STARR, JACQUELINE R · 2009 to 2010
$955k
Phenotypic and Genomic Characterization of Microtia in the Andean PopulationR00DC011282 · NIDCD · SEATTLE CHILDREN'S HOSPITAL · PI LUQUETTI, DANIELA VARELA · 2013 to 2015
$739k
NHGRI NIH HHS U24 HG008956NHGRI NIH HHS UM1 HG006493NIDCD NIH HHS R00 DC011282NIDCR NIH HHS R01 DE025468NIDCR NIH HHS RC1 DE020270NIDCR NIH HHS U01 DE025862
6 · The paper itself

Abstract

Craniofacial microsomia (CFM) is the second most common congenital facial anomaly, yet its genetic etiology remains unknown. We perform whole-exome or genome sequencing of 146 kindreds with sporadic (n = 138) or familial (n = 8) CFM, identifying a highly significant burden of loss of function variants in SF3B2 (P = 3.8 × 10

Indexed as

HaploinsufficiencyAdolescentAdultAnimalsChildExomeFemaleGenetic Association StudiesGoldenhar SyndromeHumansInfantMaleMutationNeural CrestPedigreeRNA Splicing FactorsRNA Splicing FactorsSF3B2 protein, human

Identifiers

PMID34344887
PMCPMC8333351
OpenAlexW3187441980

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.