Evidence map›Paper›PMID 34342387›Full record

ReviewWiley interdisciplinary reviews. RNA2022

Circular RNA translation, a path to hidden proteome.

Tanvi Sinha, Chirag Panigrahi, Debojyoti Das, Amaresh Chandra Panda

Open access · greenAbstract readReview
In one paragraph

Review in Wiley interdisciplinary reviews. RNA, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 129 citations in OpenAlex.

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27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Tanvi SinhaInstitute of Life Sciences, Nalco Square, Bhubaneswar, Odisha, India.
Chirag PanigrahiInstitute of Life Sciences, Nalco Square, Bhubaneswar, Odisha, India.
Debojyoti DasInstitute of Life Sciences, Nalco Square, Bhubaneswar, Odisha, India.
Amaresh Chandra PandaInstitute of Life Sciences, Nalco Square, Bhubaneswar, Odisha, India.ORCID 0000-0003-3189-8995
Institute of Life Sciences · IN

Funding

DBT-Wellcome Trust India Alliance IA/I/18/2/504017Wellcome Trust
6 · The paper itself

Abstract

Functional proteins in the cell are translated from the messenger RNA (mRNA) molecules, constituting less than 5% of the cellular transcriptome. The majority of the RNA molecules in the cell are noncoding RNAs, including rRNA, tRNA, snRNA, piRNA, lncRNA, microRNA, and poorly characterized circular RNAs (circRNAs). Recent studies established that circRNAs regulate gene expression by associating with RNA-binding proteins and microRNAs. With the growing understanding of circRNA functions, a subset of circRNAs has been reported to translate into proteins. Interestingly, the presence of Open Reading Frames (ORFs), N6-methyladenosine (m6A) modifications, and internal ribosomal entry sites (IRES) in the circRNA sequences indicate their coding potential through the cap-independent translation initiation mechanism. The purpose of this review is to highlight the mechanism of circRNA translation and the importance of circRNA-encoded proteins (circ-proteins) in cellular physiology and pathology. Here, we discuss the computational and molecular methods currently utilized to systematically identify translatable circRNAs and the functional characterization of the circ-proteins. We foresee that the ongoing and future studies on circRNA translation will uncover the hidden proteome and their therapeutic implications in human health. This article is categorized under: RNA Methods > RNA Analyses in Cells Regulatory RNAs/RNAi/Riboswitches > Regulatory RNAs Translation > Mechanisms.

Indexed as

MicroRNAsRNA, CircularHumansInternal Ribosome Entry SitesOpen Reading FramesProteomeRNAInternal Ribosome Entry SitesMicroRNAsProteomeRNARNA, Circularcap-independent translationcircRNAIRESm6Apolypeptide

Identifiers

PMID34342387
PMCPMC7613019
OpenAlexW3190095789

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.