Evidence map›Paper›PMID 34342280›Full record

ArticleActa crystallographica. Section D, Structural biology2021

Mycobacterium tuberculosis ferritin: a suitable workhorse protein for cryo-EM development.

Abril Gijsbers, Yue Zhang, Ye Gao, Peter J Peters, Raimond B G Ravelli

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Multi-species cryoEM calibration and workflow verification standard.Acta crystallographica. Section F, Structural biology communications · 2024
    Article
  4. Multi-species cryoEM calibration and workflow verification standard.bioRxiv : the preprint server for biology · 2024
    Article
  5. Iron Homeostasis inBiology · 2023
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Abril GijsbersMaastricht Multimodal Molecular Imaging Institute, Division of Nanoscopy, Maastricht University, Universiteitssingel 50, 6229 ER Maastricht, The Netherlands.ORCID 0000-0001-6622-3686
Yue ZhangMaastricht Multimodal Molecular Imaging Institute, Division of Nanoscopy, Maastricht University, Universiteitssingel 50, 6229 ER Maastricht, The Netherlands.ORCID 0000-0003-4482-1866
Ye GaoMaastricht Multimodal Molecular Imaging Institute, Division of Nanoscopy, Maastricht University, Universiteitssingel 50, 6229 ER Maastricht, The Netherlands.
Peter J PetersMaastricht Multimodal Molecular Imaging Institute, Division of Nanoscopy, Maastricht University, Universiteitssingel 50, 6229 ER Maastricht, The Netherlands.ORCID 0000-0002-2964-5684
Raimond B G RavelliMaastricht Multimodal Molecular Imaging Institute, Division of Nanoscopy, Maastricht University, Universiteitssingel 50, 6229 ER Maastricht, The Netherlands.ORCID 0000-0001-6056-5888
Maastricht University · NL

Funding

H2020 Future and Emerging Technologies 766970 Q-SortNederlandse Organisatie voor Wetenschappelijk Onderzoek 184.034.014 Nemi
6 · The paper itself

Abstract

The use of cryo-EM continues to expand worldwide and calls for good-quality standard proteins with simple protocols for their production. Here, a straightforward expression and purification protocol is presented that provides an apoferritin, bacterioferritin B (BfrB), from Mycobacterium tuberculosis with high yield and purity. A 2.12 Å resolution cryo-EM structure of BfrB is reported, showing the typical cage-like oligomer constituting of 24 monomers related by 432 symmetry. However, it also contains a unique C-terminal extension (164-181), which loops into the cage region of the shell and provides extra stability to the protein. Part of this region was ambiguous in previous crystal structures but could be built within the cryo-EM map. These findings and this protocol could serve the growing cryo-EM community in characterizing and pushing the limits of their electron microscopes and workflows.

Indexed as

ApoferritinsBacterial ProteinsCryoelectron MicroscopyCytochrome b GroupFerritinsMycobacterium tuberculosisProtein ConformationApoferritinsBacterial ProteinsbacterioferritinCytochrome b GroupFerritinscryo-EMexpression and purification protocolsferritinMycobacterium tuberculosissingle-particle analysis

Identifiers

PMID34342280
PMCPMC8329864
OpenAlexW3190214811

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.