Evidence map›Paper›PMID 34341188›Full record

ArticleActa crystallographica. Section F, Structural biology communications2021

Crystal structure of the TLDc domain of human NCOA7-AS.

Mary Arnaud-Arnould, Marine Tauziet, Olivier Moncorgé, Caroline Goujon, Mickaël Blaise

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Mary Arnaud-ArnouldIRIM, CNRS, 34293 Montpellier, France.ORCID 0000-0003-2799-1011
Marine TauzietIRIM, CNRS, 34293 Montpellier, France.
Olivier MoncorgéIRIM, CNRS, 34293 Montpellier, France.ORCID 0000-0003-0512-1824
Caroline GoujonIRIM, CNRS, 34293 Montpellier, France.ORCID 0000-0001-8571-1108
Mickaël BlaiseIRIM, CNRS, 34293 Montpellier, France.ORCID 0000-0002-7860-3464
Centre National de la Recherche Scientifique · FR

Funding

Agence Nationale de la Recherche ANR-20-CE15-0010-02European Research Council 759226
6 · The paper itself

Abstract

The TLDc [Tre2/Bub2/Cdc16 (TBC), lysin motif (LysM), domain catalytic] domain is associated with oxidation-resistance related functions and is well conserved among eukaryotes. Seven proteins possess a TLDc domain in humans, notably proteins belonging to the oxidation resistance protein (OXR), nuclear receptor coactivator 7 (NCOA7) and TBC1 domain family member 24 (TBC1D24) families. Although the mechanism is unknown, a protective role of TLDc proteins against oxidative stress, notably in the brain, has been demonstrated. Neurobiological disorders caused by mutations in the TLDc domain have also been reported. The human NCOA7 gene encodes several mRNA isoforms; among these, isoform 4, named NCOA7-AS, is up-regulated by type 1 interferon in response to viral infection. NCOA7 and NCOA7-AS both interact with several subunits of the vacuolar proton pump V-ATPase, which leads to increased acidification of the endolysosomal system and consequently impairs infection by viruses that enter their host cells through the endosomal pathway, such as influenza A virus and hepatitis C virus. Similarly to full-length NCOA7, NCOA7-AS possesses a TLDc domain in its C-terminus. Structures of TLDc domains have been reported from zebrafish and fly but not from humans. Here, the expression, purification and crystallization of the TLDc domain from NCOA7 and NCOA7-AS is reported. The crystal structure solved at 1.8 Å resolution is compared with previously solved three-dimensional structures of TLDc domains.

Indexed as

Amino Acid SequenceAnimalsCrystallizationCrystallography, X-RayDrosophila melanogasterHumansMutationNuclear Receptor CoactivatorsProtein Structure, SecondaryNCOA7 protein, humanNuclear Receptor Coactivatorshuman NCOA7-ASoxidation resistanceTLDcviral restriction factors

Identifiers

PMID34341188
PMCPMC8329711
OpenAlexW3185104013

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.