Evidence map›Paper›PMID 34340871›Full record

ReviewTrends in genetics : TIG2022

The essential but enigmatic regulatory role of HERVH in pluripotency.

Corinne E Sexton, Richard L Tillett, Mira V Han

Abstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
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  3. The diploid reference genome of a human embryonic stem cell line.bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Corinne E SextonSchool of Life Sciences, University of Nevada, Las Vegas, NV 89154, USA.
Richard L TillettNevada Institute of Personalized Medicine, Las Vegas, NV 89154, USA.
Mira V HanSchool of Life Sciences, University of Nevada, Las Vegas, NV 89154, USA; Nevada Institute of Personalized Medicine, Las Vegas, NV 89154, USA. Electronic address: mira.han@unlv.edu.

Funding

The Genome Analysis and Sequencing Pipeline (GASP)P20GM121325 · NIGMS · UNIVERSITY OF NEVADA LAS VEGAS · PI GUHA, PRASUN · 2018 to 2022
$11.5M
NIGMS NIH HHS P20 GM121325
6 · The paper itself

Abstract

Human specific endogenous retrovirus H (HERVH) is highly expressed in both naive and primed stem cells and is essential for pluripotency. Despite the proven relationship between HERVH expression and pluripotency, there is no single definitive model for the function of HERVH. Instead, several hypotheses of a regulatory function have been put forward including HERVH acting as enhancers, long noncoding RNAs (lncRNAs), and most recently as markers of topologically associating domain (TAD) boundaries. Recently several enhancer-associated lncRNAs have been characterized, which bind to Mediator and are necessary for promoter-enhancer folding interactions. We propose a synergistic model of HERVH function combining relevant findings and discuss the current limitations for its role in regulation, including the lack of evidence for a pluripotency-associated target gene.

Indexed as

Endogenous RetrovirusesRNA, Long NoncodingEnhancer Elements, GeneticHumansStem CellsRNA, Long Noncodingendogenous retrovirusenhancergene regulationmediator, topologically associating domain (TAD)stem cell

Identifiers

PMID34340871
PMCPMC8678302

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.