Evidence map›Paper›PMID 34337607›Full record

ArticleJACS Au2021

Local Mutations Can Serve as a Game Changer for Global Protein Solvent Interaction.

Ellen M Adams, Simone Pezzotti, Jonas Ahlers, Maximilian Rüttermann, Maxim Levin, Adi Goldenzweig, Yoav Peleg, Sarel J Fleishman, Irit Sagi, Martina Havenith

Open access · goldAbstract read
In one paragraph

Article in JACS Au, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Ellen M AdamsLehrstuhl für Physkalische Chemie II, Ruhr Universität Bochum, 44801 Bochum, Germany.
Simone PezzottiLehrstuhl für Physkalische Chemie II, Ruhr Universität Bochum, 44801 Bochum, Germany.ORCID https://orcid.org/0000-0003-2023-3648
Jonas AhlersLehrstuhl für Physkalische Chemie II, Ruhr Universität Bochum, 44801 Bochum, Germany.
Maximilian RüttermannLehrstuhl für Physkalische Chemie II, Ruhr Universität Bochum, 44801 Bochum, Germany.
Maxim LevinDepartment of Biological Regulation, Weizmann Institute of Science, Rehovot 7610001, Israel.
Adi GoldenzweigDepartment of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Yoav PelegStructural Proteomics Unit, Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot 7610001, Israel.
Sarel J FleishmanDepartment of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Irit SagiDepartment of Biological Regulation, Weizmann Institute of Science, Rehovot 7610001, Israel.
Martina HavenithLehrstuhl für Physkalische Chemie II, Ruhr Universität Bochum, 44801 Bochum, Germany.ORCID https://orcid.org/0000-0001-8475-5037
Ruhr University Bochum · DEWeizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although it is well-known that limited local mutations of enzymes, such as matrix metalloproteinases (MMPs), may change enzyme activity by orders of magnitude as well as its stability, the completely rational design of proteins is still challenging. These local changes alter the electrostatic potential and thus local electrostatic fields, which impacts the dynamics of water molecules close the protein surface. Here we show by a combined computational design, experimental, and molecular dynamics (MD) study that local mutations have not only a local but also a global effect on the solvent: In the specific case of the matrix metalloprotease MMP14, we found that the nature of local mutations, coupled with surface morphology, have the ability to influence large patches of the water hydrogen-bonding network at the protein surface, which is correlated with stability. The solvent contribution can be experimentally probed via terahertz (THz) spectroscopy, thus opening the door to the exciting perspective of rational protein design in which a systematic tuning of hydration water properties allows manipulation of protein stability and enzymatic activity.

Identifiers

PMID34337607
PMCPMC8317155
OpenAlexW3174049746

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.