Evidence map›Paper›PMID 34336664›Full record

ArticleFrontiers in oncology2021

Doublecortin-Like Kinase 1 (DCLK1) Is a Novel NOTCH Pathway Signaling Regulator in Head and Neck Squamous Cell Carcinoma.

Esther C Broner, Jonathan A Trujillo, Michael Korzinkin, Tejaswini Subbannayya, Nishant Agrawal, Ivan V Ozerov, Alex Zhavoronkov, Lisa Rooper, Nikita Kotlov, Le Shen and 7 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

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  15. Pleiotropic effects of DCLK1 in cancer and cancer stem cells.Frontiers in molecular biosciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 3 countries.

Esther C BronerDepartment of Otolaryngology and Head & Neck Surgery, Johns Hopkins University, School of Medicine, Baltimore, MD, United States.
Jonathan A TrujilloDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, United States.
Michael KorzinkinInSilico Medicine Hong Kong Ltd., Pak Shek Kok, Hong Kong.
Tejaswini SubbannayyaInstitute of Bioinformatics, International Technology Park, Bangalore, India.
Nishant AgrawalSection of Otolaryngology-Head and Neck Surgery, University of Chicago, Chicago, IL, United States.
Ivan V OzerovInSilico Medicine Hong Kong Ltd., Pak Shek Kok, Hong Kong.
Alex ZhavoronkovInSilico Medicine Hong Kong Ltd., Pak Shek Kok, Hong Kong.
Lisa RooperDepartment of Pathology, Johns Hopkins University, School of Medicine, Baltimore, MD, United States.
Nikita KotlovFaculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.
Le ShenDepartment of Pathology, The University of Chicago Medicine, Chicago, IL, United States.
Alexander T PearsonDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, United States.
Ari J RosenbergDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, United States.
Peter A SavageDepartment of Pathology, The University of Chicago Medicine, Chicago, IL, United States.
Vasudha MishraDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, United States.
Aditi ChatterjeeDepartment of Otolaryngology and Head & Neck Surgery, Johns Hopkins University, School of Medicine, Baltimore, MD, United States.
David SidranskyDepartment of Otolaryngology and Head & Neck Surgery, Johns Hopkins University, School of Medicine, Baltimore, MD, United States.
Evgeny IzumchenkoDepartment of Medicine, Section of Hematology and Oncology, University of Chicago, Chicago, IL, United States.
University of Chicago · USJohns Hopkins Medicine · USJohns Hopkins University · USInstitute of Bioinformatics · INLomonosov Moscow State University · RU

Funding

TUMOR SUPPRESOR GENE PROMOTER HYPERMETHYLATION FOR DETECTION OF HEAD AND NECKP50DE019032 · NIDCR · JOHNS HOPKINS UNIVERSITY · PI BORRELLO, IVAN M. · 2007 to 2016
$27.1M
Developing an Oncology Workforce for the 21st Century - Renewal 01K12CA139160 · NCI · UNIVERSITY OF CHICAGO · PI OLOPADE, OLUFUNMILAYO F., SMITH, SONALI · 2010 to 2024
$10.6M
Delineating chromatin-related gene expression signatures as a function of HNSCC progressionR01DE027809 · NIDCR · UNIVERSITY OF MARYLAND BALTIMORE · PI GAYKALOVA, DARIA A, IZUMCHENKO, EVGENY (EUGENE) G · 2019 to 2023
$2.6M
Somatic Mutations in Tissue and Saliva as Prognostic and Screening Biomarkers for Oral PremalignancyR01DE028674 · NIDCR · UNIVERSITY OF CHICAGO · PI AGRAWAL, NISHANT, LINGEN, MARK W. · 2020 to 2024
$1.9M
A reasoned approach to combination therapy development in head and neck cancerK08DE026500 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PEARSON, ALEXANDER THOMAS · 2016 to 2020
$800k
NCI NIH HHS K12 CA139160NIDCR NIH HHS K08 DE026500NIDCR NIH HHS P50 DE019032NIDCR NIH HHS R01 DE027809NIDCR NIH HHS R01 DE028674
6 · The paper itself

Abstract

Despite recent advancements, the 5 year survival of head and neck squamous cell carcinoma (HNSCC) hovers at 60%. DCLK1 has been shown to regulate epithelial-to-mesenchymal transition as well as serving as a cancer stem cell marker in colon, pancreatic and renal cancer. Although it was reported that DCLK1 is associated with poor prognosis in oropharyngeal cancers, very little is known about the molecular characterization of DCLK1 in HNSCC. In this study, we performed a comprehensive transcriptome-based computational analysis on hundreds of HNSCC patients from TCGA and GEO databases, and found that DCLK1 expression positively correlates with NOTCH signaling pathway activation. Since NOTCH signaling has a recognized role in HNSCC tumorigenesis, we next performed a series of

Indexed as

DCLK1HNSCCNOTCHtranscriptomic analysistumor microarray

Identifiers

PMID34336664
PMCPMC8323482
OpenAlexW3183467323

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.