Evidence map›Paper›PMID 34336372›Full record

ArticleProceedings. IEEE International Conference on Bioinformatics and Biomedicine2020

Deep Learning Identification of Asthma Inhaler Techniques in Clinical Notes.

Bhavani Singh Agnikula Kshatriya, Elham Sagheb, Chung-Il Wi, Jungwon Yoon, Hee Yun Seol, Young Juhn, Sunghwan Sohn

Abstract read
In one paragraph

Article in Proceedings. IEEE International Conference on Bioinformatics and Biomedicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bhavani Singh Agnikula KshatriyaDivision of Digital Health Sciences, Mayo Clinic, Rochester MN, USA.
Elham SaghebDivision of Digital Health Sciences, Mayo Clinic, Rochester MN, USA.
Chung-Il WiCommunity Pediatrics and Adolescent Medicine, Mayo Clinic, Rochester MN, USA.
Jungwon YoonDepartment of Pediatrics, Myongji Hospital, South Korea.
Hee Yun SeolPusan National University Yangsan Hospital South Korea.
Young JuhnCommunity Pediatrics and Adolescent Medicine, Mayo Clinic, Rochester MN, USA.
Sunghwan SohnDivision of Digital Health Sciences, Mayo Clinic, Rochester MN, USA.

Funding

Identification and characterization of children with asthma-associated comorbidities through computational and immune phenotypingR01HL126667 · NHLBI · MAYO CLINIC ROCHESTER · PI JUHN, YOUNG J, LIU, HONGFANG · 2015 to 2022
$4.3M
Early Detection of Mild Cognitive Impairment, Alzheimer’s Disease and Other Dementias using EHRR01AG068007 · NIA · MAYO CLINIC ROCHESTER · PI Yonas E Geda, Sunghwan Sohn · 2020 to 2026
$3.8M
Secondary use of EMR for residency training in asthma care and documentationR21AI142702 · NIAID · MAYO CLINIC ROCHESTER · PI JUHN, YOUNG J, SOHN, SUNGHWAN · 2019 to 2020
$437k
NHLBI NIH HHS R01 HL126667NIAID NIH HHS R21 AI142702NIA NIH HHS R01 AG068007
6 · The paper itself

Abstract

There are significant variabilities in clinicians' guideline-concordant documentation in asthma care. However, assessing clinicians' documentation is not feasible using only structured data but requires labor intensive chart review of electronic health records. Although the national asthma guidelines are available it is still challenging to use them as a real-time tool for providing feedback on adhering documentation guidelines for asthma care improvement. A certain guideline element, such as teaching or reviewing inhaler techniques, is difficult to capture by handcrafted rules since it requires contextual understanding of clinical narratives. This study examined a deep learning based natural language model, Bidirectional Encoder Representations from Transformers (BERT) coupled with distant supervision to identify inhaler techniques from clinical narratives. The BERT model with distant supervision outperformed the rule-based approach and achieved performance gain compared with the BERT without distant supervision.

Indexed as

adherence to asthma guidelinesdeep learningdocumentation variationsnatural language processing

Identifiers

PMID34336372
PMCPMC8323494

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.