Evidence map›Paper›PMID 34334509›Full record

ArticleThe Journal of veterinary medical science2021

Molecular phylogenetic analysis of bovine papular stomatitis viruses detected in Saga, Japan.

Shinji Hirano, Yasufumi Soga, Yuri Kuno, Satomi Doai, Shinya Tokutake, Tomoyuki Shibahara, Tadahiro Indo

Abstract read
In one paragraph

Article in The Journal of veterinary medical science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shinji HiranoSaga Prefectural Central Livestock Hygiene Service Center, 2-7-4 Wakakusu, Saga, Saga 849-0928, Japan.
Yasufumi SogaSaga Prefectural Central Livestock Hygiene Service Center, 2-7-4 Wakakusu, Saga, Saga 849-0928, Japan.
Yuri KunoSaga Prefectural Central Livestock Hygiene Service Center, 2-7-4 Wakakusu, Saga, Saga 849-0928, Japan.
Satomi DoaiNational Institute of Animal Health, National Agriculture and Food Research Organization, 3-1-5 Kannondai, Tsukuba, Ibaraki 305-0856, Japan.
Shinya TokutakeNational Institute of Animal Health, National Agriculture and Food Research Organization, 3-1-5 Kannondai, Tsukuba, Ibaraki 305-0856, Japan.
Tomoyuki ShibaharaNational Institute of Animal Health, National Agriculture and Food Research Organization, 3-1-5 Kannondai, Tsukuba, Ibaraki 305-0856, Japan.
Tadahiro IndoSaga Prefectural Central Livestock Hygiene Service Center, 2-7-4 Wakakusu, Saga, Saga 849-0928, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we performed a molecular phylogenetic analysis of six bovine papular stomatitis virus (BPSV) field strains detected from Japanese beef calves kept on a farm in Saga prefecture, a southwest part of Japan, from 2017 to 2020. The phylogenetic analysis based on a partial B2L gene (554-nt) showed that these field strains were divided into two lineages, a lineage (A-lineage) constructed by a Saga strain and strains obtained from various regions of Japan and the world, and other lineage (B-lineage) constructed by five Saga strains and strains obtained from France, USA and Iwate prefecture (a north part of Japan). Furthermore, a Saga field strain named BPSV_SAGAbv2 and strains obtained from USA and Iwate prefecture belonged to a sub-lineage blanched from B-lineage. This is the first report elucidating molecular epidemiological characters of field BPSVs obtained from Saga prefecture. The existence of the multiple lineages was thought to be related to a history of calf introduction from various regions of Japan into Saga prefecture.

Indexed as

Cattle DiseasesParapoxvirusPoxviridae InfectionsStomatitisAnimalsCattleJapanPhylogenybovine papular stomatitis virushistopathologyJapanmolecular phylogenetic analysisSaga prefecture

Identifiers

PMID34334509
PMCPMC8498829

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.