Evidence map›Paper›PMID 34333548›Full record

ArticleHorticulture research2021

An ancient whole-genome duplication event and its contribution to flavor compounds in the tea plant (Camellia sinensis).

Ya Wang, Fei Chen, Yuanchun Ma, Taikui Zhang, Pengchuan Sun, Meifang Lan, Fang Li, Wanping Fang

Open access · goldAbstract read
In one paragraph

Article in Horticulture research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 55 citations in OpenAlex.

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  11. Evolution of the biochemistry underpinning purine alkaloid metabolism in plants.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  12. Article
  13. Interspecific transfer of genetic information through polyploid bridges.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Article
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  18. Review
  19. Ethnobotanical study on herbal tea drinks in Guangxi, China.Journal of ethnobiology and ethnomedicine · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Ya Wang *College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Fei Chen *College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China. feichen@njau.edu.cn.
Yuanchun MaCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Taikui ZhangCollege of Life Sciences, Fudan University, Shanghai, 200433, China.
Pengchuan SunKey Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610065, China.ORCID http://orcid.org/0000-0002-8999-4894
Meifang LanCollege of Life Sciences, North China University of Science and Technology, Tangshan, 063099, China.
Fang LiCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Wanping FangCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China. fangwp@njau.edu.cn.
Nanjing Agricultural University · CNFudan University · CNNorth China University of Science and Technology · CNSichuan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tea, coffee, and cocoa are the three most popular nonalcoholic beverages in the world and have extremely high economic and cultural value. The genomes of four tea plant varieties have recently been sequenced, but there is some debate regarding the characterization of a whole-genome duplication (WGD) event in tea plants. Whether the WGD in the tea plant is shared with other plants in order Ericales and how it contributed to tea plant evolution remained unanswered. Here we re-analyzed the tea plant genome and provided evidence that tea experienced only WGD event after the core-eudicot whole-genome triplication (WGT) event. This WGD was shared by the Polemonioids-Primuloids-Core Ericales (PPC) sections, encompassing at least 17 families in the order Ericales. In addition, our study identified eight pairs of duplicated genes in the catechins biosynthesis pathway, four pairs of duplicated genes in the theanine biosynthesis pathway, and one pair of genes in the caffeine biosynthesis pathway, which were expanded and retained following this WGD. Nearly all these gene pairs were expressed in tea plants, implying the contribution of the WGD. This study shows that in addition to the role of the recent tandem gene duplication in the accumulation of tea flavor-related genes, the WGD may have been another main factor driving the evolution of tea flavor.

Identifiers

PMID34333548
PMCPMC8325681
OpenAlexW3190298024

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.