Evidence map›Paper›PMID 34330922›Full record

ArticleNature communications2021

Structural evidence for extracellular silica formation by diatoms.

Boaz Mayzel, Lior Aram, Neta Varsano, Sharon G Wolf, Assaf Gal

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
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  6. Review
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  10. Article
  11. Hexagonal Patterns in Diatom Silica Form via a Directional Two-Step Process.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  12. Article
  13. Review
  14. Modification of Living Diatom,ACS applied bio materials · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Boaz Mayzel *Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0001-9426-9905
Lior Aram *Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-3890-0456
Neta VarsanoDepartment of Structural Biology, Weizmann Institute of Science, Rehovot, Israel.
Sharon G WolfDepartment of Chemical Research Support, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-5337-5063
Assaf GalDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel. assaf.gal@weizmann.ac.il.ORCID 0000-0003-1488-1227
Weizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The silica cell wall of diatoms, a widespread group of unicellular microalgae, is an exquisite example for the ability of organisms to finely sculpt minerals under strict biological control. The prevailing paradigm for diatom silicification is that this is invariably an intracellular process, occurring inside specialized silica deposition vesicles that are responsible for silica precipitation and morphogenesis. Here, we study the formation of long silicified extensions that characterize many diatom species. We use cryo-electron tomography to image silica formation in situ, in 3D, and at a nanometer-scale resolution. Remarkably, our data suggest that, contradictory to the ruling paradigm, these intricate structures form outside the cytoplasm. In addition, the formation of these silica extensions is halted at low silicon concentrations that still support the formation of other cell wall elements, further alluding to a different silicification mechanism. The identification of this unconventional strategy expands the suite of mechanisms that diatoms use for silicification.

Indexed as

Cell CycleCell MembraneCell WallCryoelectron MicroscopyDiatomsElectron Microscope TomographyExtracellular SpaceMicroscopy, Electron, ScanningMicroscopy, Electron, TransmissionMicrotubulesSilicon DioxideSilicon Dioxide

Identifiers

PMID34330922
PMCPMC8324917
OpenAlexW3185450968

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.