Evidence map›Paper›PMID 34330269›Full record

ArticleBMC medical informatics and decision making2021

Study on structured method of Chinese MRI report of nasopharyngeal carcinoma.

Xin Huang, Hui Chen, Jing-Dong Yan

Abstract read
In one paragraph

Article in BMC medical informatics and decision making, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Xin HuangSchool of Biomedical Engineering, Southern Medical University, Guangzhou, 510515, Guangdong, China.
Hui ChenShuguang Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai, 201203, China.
Jing-Dong YanNanfang Hospital, Southern Medical University, Guangzhou, 510515, Guangdong, China. jdyan@smu.edu.cn.ORCID 0000-0002-2261-2046

Funding

Science and Technology Planning Project of Guangdong Province 2016A020216016
6 · The paper itself

Abstract

backgroundImage text is an important text data in the medical field at it can assist clinicians in making a diagnosis. However, due to the diversity of languages, most descriptions in the image text are unstructured data. The same medical phenomenon may also be described in various ways, such that it remains challenging to conduct text structure analysis. The aim of this research is to develop a feasible approach that can automatically convert nasopharyngeal cancer reports into structured text and build a knowledge network.

methodsIn this work, we compare commonly used named entity recognition (NER) models, choose the optimal model as our triplet extraction model, and present a Chinese structuring algorithm. Finally, we visualize the results of the algorithm in the form of a knowledge network of nasopharyngeal cancer.

resultsIn NER, both accuracy and recall of the BERT-CRF model reached 99%. The structured extraction rate is 84.74%, and the accuracy is 89.39%. The architecture based on recurrent neural network does not rely on medical dictionaries or word segmentation tools and can realize triplet recognition.

conclusionsThe BERT-CRF model has high performance in NER, and the triplet can reflect the content of the image report. This work can provide technical support for the construction of a nasopharyngeal cancer database.

Indexed as

LanguageNasopharyngeal NeoplasmsChinaHumansMagnetic Resonance ImagingNasopharyngeal CarcinomaKnowledge networkNamed entity recognitionStructured medical text

Identifiers

PMID34330269
PMCPMC8323197

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.