Evidence map›Paper›PMID 34329421›Full record

ArticleJournal of experimental botany2021

Jasmonate inhibits adventitious root initiation through repression of CKX1 and activation of RAP2.6L transcription factor in Arabidopsis.

Asma Dob, Abdellah Lakehal, Ondrej Novak, Catherine Bellini

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

  1. Plants (Basel, Switzerland) · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Depletion of Gibberellin Signaling Up-RegulatesInternational journal of molecular sciences · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Dual roles of jasmonate in adventitious rooting.Journal of experimental botany · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Asma DobUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-90736 Umeå, Sweden.ORCID 0000-0002-1013-1085
Abdellah LakehalUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-90736 Umeå, Sweden.ORCID 0000-0003-1943-6237
Ondrej NovakLaboratory of Growth Regulators, Faculty of Science, Palacký University and Institute of Experimental Botany, Academy of Sciences of the Czech Republic, 78371 Olomouc, Czech Republic.ORCID 0000-0003-3452-0154
Catherine BelliniUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-90736 Umeå, Sweden.ORCID 0000-0003-2985-6649
Swedish University of Agricultural Sciences · SEAgroParisTech · FRUmeå Plant Science Centre · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adventitious rooting is a de novo organogenesis process that enables plants to propagate clonally and cope with environmental stresses. Adventitious root initiation (ARI) is controlled by interconnected transcriptional and hormonal networks, but there is little knowledge of the genetic and molecular programs orchestrating these networks. Thus, we have applied genome-wide transcriptome profiling to elucidate the transcriptional reprogramming events preceding ARI. These reprogramming events are associated with the down-regulation of cytokinin (CK) signaling and response genes, which could be triggers for ARI. Interestingly, we found that CK free base (iP, tZ, cZ, and DHZ) content declined during ARI, due to down-regulation of de novo CK biosynthesis and up-regulation of CK inactivation pathways. We also found that MYC2-dependent jasmonate (JA) signaling inhibits ARI by down-regulating the expression of the CYTOKININ OXIDASE/DEHYDROGENASE1 (CKX1) gene. We also demonstrated that JA and CK synergistically activate expression of the transcription factor RELATED to APETALA2.6 LIKE (RAP2.6L), and constitutive expression of this transcription factor strongly inhibits ARI. Collectively, our findings reveal that previously unknown genetic interactions between JA and CK play key roles in ARI.

Indexed as

ArabidopsisArabidopsis ProteinsCyclopentanesGene Expression Regulation, PlantOxylipinsPlant RootsTranscription FactorsArabidopsis ProteinsCyclopentanesjasmonic acidOxylipinsRAP2.6L protein, ArabidopsisTranscription FactorsAdventitious rootsArabidopsisCKX1cytokininsjasmonatelightMYC2RAP2.6Lvegetative propagation

Identifiers

PMID34329421
PMCPMC8547155
OpenAlexW3185038299

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.