Evidence map›Paper›PMID 34329309›Full record

ArticlePloS one2021

Zika virus isolation, propagation, and quantification using multiple methods.

Worawat Dangsagul, Kriengsak Ruchusatsawat, Apiwat Tawatsin, Don Changsom, Pirom Noisumdaeng, Sukontip Putchakarn, Chayawat Phatihattakorn, Prasert Auewarakul, Pilaipan Puthavathana

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Worawat DangsagulFaculty of Medical Technology, Mahidol University, Nakhon Pathom, Thailand.
Kriengsak RuchusatsawatDepartment of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand.
Apiwat TawatsinDepartment of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand.
Don ChangsomDepartment of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand.
Pirom NoisumdaengFaculty of Public Health, Thammasat University, Pathum Thani, Thailand.
Sukontip PutchakarnDepartment of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand.
Chayawat PhatihattakornFaculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.
Prasert AuewarakulFaculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.
Pilaipan PuthavathanaFaculty of Medical Technology, Mahidol University, Nakhon Pathom, Thailand.ORCID 0000-0002-5481-9156
Ministry of Public Health · THMahidol University · THSiriraj Hospital · THThammasat University · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zika virus (ZIKV) was isolated from the archival urine, serum, and autopsy specimens by intrathoracic inoculation of Toxorhynchitis splendens and followed by three blind sub-passaging in C6/36 mosquito cells. The virus isolates were identified using an immunofluorescence assay and real-time reverse transcription-polymerase chain reaction (real-time RT-PCR). This study analyzed 11 ZIKV isolates. One isolate (0.6%) was obtained from 171 urine samples, eight (8.7%) from 92 serum samples and two from tissues of an abortive fetus. After propagation in C6/36 cells, ZIKV was titrated by plaque and focus forming unit (FFU) assays in Vero cell monolayers, and viral genomes were determined via real-time and digital RT-PCR. Plaque and FFU assay quantitations were comparable, with the amount of infectious viruses averaging 106-107 PFU or FFU/ml. Real-time RT-PCR semi-quantified the viral genome numbers, with Ct values varying from 12 to 14. Digital RT-PCR, which precisely determines the numbers of the viral genomes, consistently averaged 10-100 times higher than the number of infectious units. There was good correlation between the results of these titration methods. Therefore, the selection of a method should be based on the objectives of each research studies.

Indexed as

Genome, ViralReal-Time Polymerase Chain ReactionRNA, ViralZika VirusZika Virus InfectionAnimalsChlorocebus aethiopsCulicidaeHumansVero CellsRNA, Viral

Identifiers

PMID34329309
PMCPMC8323943
OpenAlexW3183876386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.