Evidence map›Paper›PMID 34328412›Full record

ArticleMicrobial genomics2021

Phylogeography and resistome of pneumococcal meningitis in West Africa before and after vaccine introduction.

Madikay Senghore, Peggy-Estelle Tientcheu, Archibald Kwame Worwui, Sheikh Jarju, Catherine Okoi, Sambou M S Suso, Ebenezer Foster-Nyarko, Chinelo Ebruke, Mohamadou Sonko, Mamdou Hama Kourna and 19 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbial genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Madikay SenghoreWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.
Peggy-Estelle TientcheuWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.
Archibald Kwame WorwuiWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.
Sheikh JarjuWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.
Catherine OkoiWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.
Sambou M S SusoWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.
Ebenezer Foster-NyarkoWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.
Chinelo EbrukeWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.
Mohamadou SonkoHopital d'Enfants Albert Royer, BP 5297, Fann, Dakar, Senegal.
Mamdou Hama KournaHospital National Niamey, BP 238, Niamey, Niger.
Joseph AgossouDepartment of Mother and Child, Faculty of Medicine, University of Parakou, Parakou, Benin.
Enyonam TsolenyanuLaboratoire Microbiologie, Centre Hospitalier Universitaire de Tokoin Lomé, BP 57, Lomé, Togo.
Lorna Awo RennerCentral Laboratory Services, Korle-Bu Teaching Hospital, P.O. Box 77, Accra, Ghana.
Daniel AnsongKomfo Anokye Teaching Hospital, P.O. Box 1934, Kumasi, Ghana.
Bakary SannehEdward Francis Small Teaching Hospital, Banjul, The Gambia.
Catherine Boni CisseLaboratoire Central du CHU de Yopougon, Institut Pasteur de Cote d'Ivoire, Abidjan, Ivory Coast.
Angeline BoulaCentre Mere et Enfant de la Fondation, Chantal Biya, Yaounde, Cameroon.
Berthe MiwandaInstitut National de Recherche Biomedicale, Kinshasa, Democratic Republic of Congo.
Stephanie W LoParasites and Microbes, Wellcome Sanger Institute, Hinxton, UK.
Rebecca A GladstoneParasites and Microbes, Wellcome Sanger Institute, Hinxton, UK.
Stephanie SchwartzCenters for Disease Control and Prevention, Atlanta, GA, USA.
Paulina HawkinsCenters for Disease Control and Prevention, Atlanta, GA, USA.
Lesley McGeeCenters for Disease Control and Prevention, Atlanta, GA, USA.
Keith P KlugmanRollins School of Public Health, Emory University, Atlanta, GA, USA.
Robert F BreimanRollins School of Public Health, Emory University, Atlanta, GA, USA.
Stephen D BentleyParasites and Microbes, Wellcome Sanger Institute, Hinxton, UK.
Jason M MwendaWorld Health Organization Regional Office for Africa, BP 6, Brazzaville, Republic of Congo.
Brenda Anna Kwambana-AdamsWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.
Martin AntonioWHO Collaborating Centre for New Vaccines Surveillance, Medical Research Council Unit The Gambia at London School of Hygiene and Tropical Medicine, P.O. Box 273, Banjul, The Gambia.

Funding

World Health Organization 001
6 · The paper itself

Abstract

Despite contributing to the large disease burden in West Africa, little is known about the genomic epidemiology of

Indexed as

AdolescentAfrica, WesternAntitubercular AgentsChildChild, PreschoolDrug Resistance, Multiple, BacterialGenome, BacterialHeptavalent Pneumococcal Conjugate VaccineHumansInfantInfant, NewbornMeningitis, PneumococcalMicrobial Sensitivity TestsPneumococcal VaccinesStreptococcus pneumoniaeWhole Genome Sequencing13-valent pneumococcal vaccineAntitubercular AgentsHeptavalent Pneumococcal Conjugate VaccinePneumococcal Vaccinesantibiotic resistancegenomic epidemiologypaediatric meningitispneumococcusWest and Central Africa

Identifiers

PMID34328412
PMCPMC8477402

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.