Evidence map›Paper›PMID 34327653›Full record

ArticleJournal of general internal medicine2022

Predicting Life Expectancy to Target Cancer Screening Using Electronic Health Record Clinical Data.

Alexandra K Lee, Bocheng Jing, Sun Y Jeon, W John Boscardin, Sei J Lee

Abstract read
In one paragraph

Article in Journal of general internal medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alexandra K LeeDivision of Geriatrics, University of California, 4150 Clement St, VA181G, San Francisco, CA, 94121, USA. alexandra.lee@ucsf.edu.ORCID 0000-0001-9525-3833
Bocheng JingSan Francisco Veterans Affairs Medical Center, San Francisco, USA.
Sun Y JeonDivision of Geriatrics, University of California, 4150 Clement St, VA181G, San Francisco, CA, 94121, USA.
W John BoscardinDivision of Geriatrics, University of California, 4150 Clement St, VA181G, San Francisco, CA, 94121, USA.
Sei J LeeDivision of Geriatrics, University of California, 4150 Clement St, VA181G, San Francisco, CA, 94121, USA.

Funding

VARC CoreP30AG044281 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Alexander Keliimoeanu Smith · 2013 to 2026
$19.9M
RESEARCH TRAINING IN GERIATRIC MEDICINET32AG000212 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Alexander Keliimoeanu Smith · 1991 to 2026
$7.7M
Mentoring Patient-Oriented Research to Individualize Care for Hospitalized Older Adults with and without Alzheimer's Disease and Related DementiasK24AG066998 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Sei Lee · 2021 to 2026
$1.1M
Contributions of Hypoglycemia and Hyperglycemia to Adverse Geriatric Outcomes in NH Residents with Diabetes and Alzheimer's Disease and Related Dementias (ADRD)K01AG073532 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LEE, ALEXANDRA KATHRYN · 2021 to 2025
$714k
Development and Validation of 10-Year Life Expectancy Calculators to Individualize Veterans’ Prevention DecisionsI01HX002135 · VA · VETERANS AFFAIRS MED CTR SAN FRANCISCO · PI LEE, SEI · 2018 to 2021
–
HSRD VA 5I01HX002135HSRD VA I01 HX002135NIA NIH HHS K01 AG073532NIA NIH HHS K24 AG066998NIA NIH HHS P30 AG044281NIA NIH HHS T32 AG000212NIA NIH HHS T32AG000212
6 · The paper itself

Abstract

backgroundGuidelines recommend breast and colorectal cancer screening for older adults with a life expectancy >10 years. Most mortality indexes require clinician data entry, presenting a barrier for routine use in care. Electronic health records (EHR) are a rich clinical data source that could be used to create individualized life expectancy predictions to identify patients for cancer screening without data entry.

objectiveTo develop and internally validate a life expectancy calculator from structured EHR data.

designRetrospective cohort study using national Veteran's Affairs (VA) EHR databases. PATIENTS: Veterans aged 50+ with a primary care visit during 2005. MAIN MEASURES: We assessed demographics, diseases, medications, laboratory results, healthcare utilization, and vital signs 1 year prior to the index visit. Mortality follow-up was complete through 2017. Using the development cohort (80% sample), we used LASSO Cox regression to select ~100 predictors from 913 EHR data elements. In the validation cohort (remaining 20% sample), we calculated the integrated area under the curve (iAUC) and evaluated calibration. KEY

resultsIn 3,705,122 patients, the mean age was 68 years and the majority were male (97%) and white (85%); nearly half (49%) died. The life expectancy calculator included 93 predictors; age and gender most strongly contributed to discrimination; diseases also contributed significantly while vital signs were negligible. The iAUC was 0.816 (95% confidence interval, 0.815, 0.817) with good calibration.

conclusionsWe developed a life expectancy calculator using VA EHR data with excellent discrimination and calibration. Automated life expectancy prediction using EHR data may improve guideline-concordant breast and colorectal cancer screening by identifying patients with a life expectancy >10 years.

Indexed as

Colorectal NeoplasmsEarly Detection of CancerAgedElectronic Health RecordsFemaleHumansLife ExpectancyMaleMiddle AgedRetrospective Studies

Identifiers

PMID34327653
PMCPMC8858374

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.