Evidence map›Paper›PMID 34327323›Full record

ReviewPlant communications2021

Hyperspectral reflectance-based phenotyping for quantitative genetics in crops: Progress and challenges.

Marcin Grzybowski, Nuwan K Wijewardane, Abbas Atefi, Yufeng Ge, James C Schnable

Abstract readReview
In one paragraph

Review in Plant communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
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  11. Phenotyping cotton leaf chlorophyll viaFrontiers in plant science · 2024
    Article
  12. Article
  13. Review
  14. Article
  15. Article
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  17. Article
  18. Quantification of Photosynthetic Pigments inPlant phenomics (Washington, D.C.) · 2023
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Marcin GrzybowskiCenter for Plant Science Innovation and Department of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.
Nuwan K WijewardaneDepartment of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE, USA.
Abbas AtefiDepartment of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE, USA.
Yufeng GeDepartment of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE, USA.
James C SchnableCenter for Plant Science Innovation and Department of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many biochemical and physiological properties of plants that are of interest to breeders and geneticists have extremely low throughput and/or can only be measured destructively. This has limited the use of information on natural variation in nutrient and metabolite abundance, as well as photosynthetic capacity in quantitative genetic contexts where it is necessary to collect data from hundreds or thousands of plants. A number of recent studies have demonstrated the potential to estimate many of these traits from hyperspectral reflectance data, primarily in ecophysiological contexts. Here, we summarize recent advances in the use of hyperspectral reflectance data for plant phenotyping, and discuss both the potential benefits and remaining challenges to its application in plant genetics contexts. The performances of previously published models in estimating six traits from hyperspectral reflectance data in maize were evaluated on new sample datasets, and the resulting predicted trait values shown to be heritable (e.g., explained by genetic factors) were estimated. The adoption of hyperspectral reflectance-based phenotyping beyond its current uses may accelerate the study of genes controlling natural variation in biochemical and physiological traits.

Indexed as

Hyperspectral ImagingPhenotypePlant BreedingCrops, AgriculturalGeneticsPhotosynthesisZea mayshyperspectral reflectancemaizephenotypingquantitative genetics

Identifiers

PMID34327323
PMCPMC8299078

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.