Evidence map›Paper›PMID 34326371›Full record

ArticleScientific reports2021

Cooperative roles of introns 1 and 2 of tobacco resistance gene N in enhanced N transcript expression and antiviral defense responses.

Chihiro Ikeda, Kazuo Taku, Tsumugi Miyazaki, Rikako Shirai, Richard S Nelson, Hiroshi Nyunoya, Yasuhiko Matsushita, Nobumitsu Sasaki

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Breeding science · 2023
    Article
  3. Understanding tobamovirus-plant interactions: implications for breeding resistance to tomato brown rugose fruit virus.Journal of plant pathology : an international journal of the Italian Phytopathological Society · 2023
    Review
  4. The Ups and Downs of PlantFrontiers in plant science · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Chihiro IkedaGraduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Kazuo TakuGene Research Center, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Tsumugi MiyazakiGraduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Rikako ShiraiGraduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Richard S NelsonDepartment of Entomology and Plant Pathology, Oklahoma State University, Stillwater, OK, USA.
Hiroshi NyunoyaGene Research Center, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Yasuhiko MatsushitaGene Research Center, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Nobumitsu SasakiGraduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan. chaki@cc.tuat.ac.jp.
Tokyo University of Agriculture and Technology · JPOklahoma State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The tobacco virus resistance gene N contains four introns. Transient expression of transcripts from an N transgene containing these introns and driven by the native promoter in the presence of the elicitor of tobacco mosaic virus resulted in its increased expression. The requirement of the native promoter, the elicitor, or the individual introns for enhanced expression of N has not been fully studied. Here, we determined that 35S promoter-driven N transcript expression could be enhanced in the presence of the four introns regardless of the co-expression of the virus elicitor in tobacco. Function analyses using a series of N transgenes with different combination of introns revealed that the presence of intron 1 more so than intron 2 allowed higher accumulation of premature and mature N transcripts; however, both introns were important for not only enhanced gene expression but also for induction of cell death in tobacco and induced local resistance to spread of virus in Nicotiana benthamiana. Our findings indicate that introns 1 and 2 cooperatively contribute to N expression and virus resistance.

Indexed as

Gene ExpressionGenes, PlantIntronsCell DeathDisease ResistanceGene Expression Regulation, PlantHost-Pathogen InteractionsNicotianaPlant DiseasesPlant ProteinsPlants, Genetically ModifiedPromoter Regions, GeneticTobacco Mosaic VirusTransgenesN protein, Nicotiana glutinosaPlant Proteins

Identifiers

PMID34326371
PMCPMC8322402
OpenAlexW3185042945

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.