Evidence map›Paper›PMID 34326363›Full record

ArticleScientific reports2021

Clustering and control for adaptation uncovers time-warped spike time patterns in cortical networks in vivo.

James B Isbister, Vicente Reyes-Puerta, Jyh-Jang Sun, Illia Horenko, Heiko J Luhmann

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  4. Neural coding of space by time.Biological cybernetics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

James B IsbisterOxford Centre for Theoretical Neuroscience and Artificial Intelligence, Department of Experimental Psychology, University of Oxford, Oxford, UK. james.isbister@epfl.ch.
Vicente Reyes-PuertaInstitute of Physiology, University Medical Center, Johannes Gutenberg University, Mainz, Germany.
Jyh-Jang SunInstitute of Physiology, University Medical Center, Johannes Gutenberg University, Mainz, Germany.
Illia HorenkoFaculty of Informatics, Universita della Svizzera Italiana, Via G. Buffi 13, 6900, Lugano, Switzerland.
Heiko J LuhmannInstitute of Physiology, University Medical Center, Johannes Gutenberg University, Mainz, Germany.
Johannes Gutenberg University Mainz · DEIMEC · BEUniversità della Svizzera italiana · CHUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

How information in the nervous system is encoded by patterns of action potentials (i.e. spikes) remains an open question. Multi-neuron patterns of single spikes are a prime candidate for spike time encoding but their temporal variability requires further characterisation. Here we show how known sources of spike count variability affect stimulus-evoked spike time patterns between neurons separated over multiple layers and columns of adult rat somatosensory cortex in vivo. On subsets of trials (clusters) and after controlling for stimulus-response adaptation, spike time differences between pairs of neurons are "time-warped" (compressed/stretched) by trial-to-trial changes in shared excitability, explaining why fixed spike time patterns and noise correlations are seldom reported. We show that predicted cortical state is correlated between groups of 4 neurons, introducing the possibility of spike time pattern modulation by population-wide trial-to-trial changes in excitability (i.e. cortical state). Under the assumption of state-dependent coding, we propose an improved potential encoding capacity.

Indexed as

Nervous SystemNervous System Physiological PhenomenaAction PotentialsAnimalsHumansModels, NeurologicalNeuronsRatsSomatosensory CortexVisual Cortex

Identifiers

PMID34326363
PMCPMC8322153
OpenAlexW3185135534

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.