Evidence map›Paper›PMID 34324494›Full record

ArticlePLoS computational biology2021

A Keller-Segel model for C elegans L1 aggregation.

Leon Avery, Brian Ingalls, Catherine Dumur, Alexander Artyukhin

Abstract read
In one paragraph

Article in PLoS computational biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Phenotypic and metabonomics studies of FMOs in C. elegans and their roles in lifespan extension.Metabolomics : Official journal of the Metabolomic Society · 2025
    Article
  2. On collective behavior inFrontiers in neurorobotics · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Leon AveryDepartment of Applied Mathematics, University of Waterloo, Waterloo, Ontario, Canada.ORCID 0000-0001-5548-3044
Brian IngallsDepartment of Applied Mathematics, University of Waterloo, Waterloo, Ontario, Canada.ORCID 0000-0003-2118-3881
Catherine DumurDepartment of Pathology, Virginia Commonwealth University, Richmond, Virginia, United States of America.
Alexander ArtyukhinChemistry Department, State University of New York, College of Environmental Science and Forestry, Syracuse, New York, United States of America.ORCID 0000-0002-1734-266X

Funding

Starvation-induced social behavior in C. elegansR01GM113692 · NIGMS · BOYCE THOMPSON INST FOR PLANT RESEARCH · PI SCHROEDER, FRANK CLEMENS · 2016 to 2018
$1.1M
NIGMS NIH HHS R01 GM113692
6 · The paper itself

Abstract

We describe a mathematical model for the aggregation of starved first-stage C elegans larvae (L1s). We propose that starved L1s produce and respond chemotactically to two labile diffusible chemical signals, a short-range attractant and a longer range repellent. This model takes the mathematical form of three coupled partial differential equations, one that describes the movement of the worms and one for each of the chemical signals. Numerical solution of these equations produced a pattern of aggregates that resembled that of worm aggregates observed in experiments. We also describe the identification of a sensory receptor gene, srh-2, whose expression is induced under conditions that promote L1 aggregation. Worms whose srh-2 gene has been knocked out form irregularly shaped aggregates. Our model suggests this phenotype may be explained by the mutant worms slowing their movement more quickly than the wild type.

Indexed as

Models, BiologicalAnimal CommunicationAnimalsBehavior, AnimalCaenorhabditis elegansCaenorhabditis elegans ProteinsComputational BiologyComputer SimulationGene ExpressionGene Knockout TechniquesLarvaMathematical ConceptsReceptors, G-Protein-CoupledSocial BehaviorStarvationCaenorhabditis elegans ProteinsReceptors, G-Protein-Coupled

Identifiers

PMID34324494
PMCPMC8354456

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.