Evidence map›Paper›PMID 34321580›Full record

ArticleScientific reports2021

A prospective study revealing the role of an immune-related eRNA, WAKMAR2, in breast cancer.

Linbang Wang, Jingkun Liu, Jiaojiao Tai, Nian Zhou, Tianji Huang, Yuzhou Xue, Zhengxue Quan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Enhancer RNA (eRNA) in Human Diseases.International journal of molecular sciences · 2022
    Review
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Linbang WangDepartment of Orthopedic Surgery, The First Affiliated Hospital of Chongqing Medical University, Chongqing, 400016, China.
Jingkun LiuHonghui Hospital, Xian Jiaotong University, Xi'an, 710072, China.
Jiaojiao TaiHonghui Hospital, Xian Jiaotong University, Xi'an, 710072, China.
Nian ZhouDepartment of Orthopedic Surgery, The First Affiliated Hospital of Chongqing Medical University, Chongqing, 400016, China.
Tianji HuangDepartment of Orthopedic Surgery, The First Affiliated Hospital of Chongqing Medical University, Chongqing, 400016, China.
Yuzhou XueDepartment of Cardiology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, 400016, China.
Zhengxue QuanDepartment of Orthopedic Surgery, The First Affiliated Hospital of Chongqing Medical University, Chongqing, 400016, China. quanzx18@126.com.
First Affiliated Hospital of Chongqing Medical University · CNChongqing Medical University · CNXi'an Honghui Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enhancer RNAs (eRNAs) are a subclass of non-coding RNAs that are generated during the transcription of enhancer regions and play an important role in tumourigenesis. In this study, we focused on the crucial eRNAs that participate in immune responses in invasive breast cancer (IBC). We first used The Cancer Genome Atlas and Human enhancer RNA Atlas to screen for tissue-specific eRNAs and their target genes. Through Pearson correlation analysis with immune genes, the eRNA WAKMAR2 was identified as a key candidate involved in IBC. Our further research suggested that WAKMAR2 is crucial in regulating the tumour microenvironment and may function by regulating immune-related genes, including IL27RA, RAC2, FABP7, IGLV1-51, IGHA1, and IGHD. Quantitative reverse transcription-polymerase chain reaction was used to detect the expression of WAKMAR2 in IBC and normal tissues, and the effect of WAKMAR2 on the regulation of downstream genes in MB-231 and MCF7 cells was studied in vitro. WAKMAR2 was found to be highly involved in tumour immunity and was downregulated in IBC tissues. Furthermore, the expression of WAKMAR2 and its target genes was observed at the pan-cancer level. This study provides evidence to suggest new potential targets for the treatment of breast cancer.

Indexed as

Enhancer Elements, GeneticAtlases as TopicBreast NeoplasmsCarcinogenesisCell Line, TumorDwarfism, PituitaryFatty Acid-Binding Protein 7FemaleGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansImmunoglobulinsMCF-7 CellsModels, MolecularNeoplasm InvasivenessNucleic Acid ConformationFABP7 protein, humanFatty Acid-Binding Protein 7IGHA1 protein, humanIL27RA protein, humanImmunoglobulinsReceptors, InterleukinRNA, UntranslatedTumor Suppressor Proteins

Identifiers

PMID34321580
PMCPMC8319425
OpenAlexW3183932374

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.