ArticleScientific reports2021
The first draft genome of feather grasses using SMRT sequencing and its implications in molecular studies of Stipa.
Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
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Who cites it
7 citing papers in PubMed, 15 citations in OpenAlex.
- Comparative and phylogenetic analyses of Stipa L. (Poaceae) species based on the complete chloroplast genome sequences.BMC plant biology · 2025Article
- Phylogenetic reconstruction and species delimitation in Stipeae with special reference to Stipa (Poaceae, Pooideae) using mitochondrial genomes.Cladistics : the international journal of the Willi Hennig Society · 2025Article
- The chloroplast genome elucidates the origin of mulberry in Central Asia.Frontiers in plant science · 2025Article
- Article
- Elucidation of the evolutionary history ofFrontiers in plant science · 2023Article
- Characterization of the complete chloroplast genome sequence ofMitochondrial DNA. Part B, Resources · 2022Article
- Evidence for extensive hybridisation and past introgression events in feather grasses using genome-wide SNP genotyping.BMC plant biology · 2021Article
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Authors and funding
5 authors at 3 institutions in 5 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Eurasian plant Stipa capillata is the most widespread species within feather grasses. Many taxa of the genus are dominants in steppe plant communities and can be used for their classification and in studies related to climate change. Moreover, some species are of economic importance mainly as fodder plants and can be used for soil remediation processes. Although large-scale molecular data has begun to appear, there is still no complete or draft genome for any Stipa species. Thus, here we present a single-molecule long-read sequencing dataset generated using the Pacific Biosciences Sequel System. A draft genome of about 1004 Mb was obtained with a contig N50 length of 351 kb. Importantly, here we report 81,224 annotated protein-coding genes, present 77,614 perfect and 58 unique imperfect SSRs, reveal the putative allopolyploid nature of S. capillata, investigate the evolutionary history of the genus, demonstrate structural heteroplasmy of the chloroplast genome and announce for the first time the mitochondrial genome in Stipa. The assembled nuclear, mitochondrial and chloroplast genomes provide a significant source of genetic data for further works on phylogeny, hybridisation and population studies within Stipa and the grass family Poaceae.
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