Evidence map›Paper›PMID 34319783›Full record

ArticleJournal of virology2021

nsP4 Is a Major Determinant of Alphavirus Replicase Activity and Template Selectivity.

Laura Sandra Lello, Koen Bartholomeeusen, Sainan Wang, Sandra Coppens, Rennos Fragkoudis, Luke Alphey, Kevin K Ariën, Andres Merits, Age Utt

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Laura Sandra LelloInstitute of Technology, University of Tartugrid.10939.32, Tartu, Estonia.
Koen BartholomeeusenDepartment of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Sainan WangInstitute of Technology, University of Tartugrid.10939.32, Tartu, Estonia.
Sandra CoppensDepartment of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Rennos FragkoudisUniversity of Nottingham, School of Veterinary Medicine and Science, Loughborough, United Kingdom.
Luke AlpheyThe Pirbright Institute, Woking, United Kingdom.
Kevin K AriënDepartment of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Andres MeritsInstitute of Technology, University of Tartugrid.10939.32, Tartu, Estonia.ORCID 0000-0001-8193-0071
Age UttInstitute of Technology, University of Tartugrid.10939.32, Tartu, Estonia.
University of Tartu · EEInstituut voor Tropische Geneeskunde · BEThe Pirbright Institute · GBUniversity of Antwerp · BEUniversity of Nottingham · GB

Funding

GENETIC, BIOCHEMICAL AND DIETARY PROBES OF AGINGR01AG001154 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI RUSSELL, RICHARD L · 1985 to 1987
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Biotechnology and Biological Sciences Research Council BBS/E/I/00007038Biotechnology and Biological Sciences Research Council BBS/E/I/00007039EC | European Regional Development Fund (ERDF) 2014-2020.4.01.15-013Estonian Research Council PRG1154Medical Research Council MC_PC_16028Research Foundation Flanders KAN1526318NUKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BBS/E/I/00007033 BBS/E/I/00007038 and BBS/E/I/00007039Wellcome TrustWellcome Trust (Wellcome) 200171/Z/15/Z
6 · The paper itself

Abstract

Alphaviruses have positive-strand RNA genomes containing two open reading frames (ORFs). The first ORF encodes the nonstructural (ns) polyproteins P123 and P1234 that act as precursors for the subunits of the viral RNA replicase (nsP1 to nsP4). Processing of P1234 leads to the formation of a negative-strand replicase consisting of nsP4 (RNA polymerase) and P123 components. Subsequent processing of P123 results in a positive-strand replicase. The second ORF encoding the structural proteins is expressed via the synthesis of a subgenomic RNA. Alphavirus replicase is capable of using template RNAs that contain essential

Indexed as

AlphavirusAlphavirus InfectionsAnimalsBase SequenceCell LineDNA-Directed RNA PolymerasesHumansPolyproteinsRNA-Dependent RNA PolymeraseRNA, ViralViral Nonstructural ProteinsViral Replicase Complex ProteinsVirus ReplicationDNA-Directed RNA PolymerasesPolyproteinsRNA-Dependent RNA PolymeraseRNA, ViralViral Nonstructural ProteinsViral Replicase Complex Proteinsalphavirusgenetic recombinationreplicaseRNA polymerasesRNA replication

Identifiers

PMID34319783
PMCPMC8475546
OpenAlexW3183891994

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.