Evidence map›Paper›PMID 34316718›Full record

ArticleNAR cancer2021

G-quadruplexes mark alternative lengthening of telomeres.

Sunny Y Yang, Emily Y C Chang, Joanne Lim, Harwood H Kwan, David Monchaud, Stephen Yip, Peter C Stirling, Judy M Y Wong

Open access · goldAbstract read
In one paragraph

Article in NAR cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 59 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Sunny Y YangFaculty of Pharmaceutical Sciences, University of British Columbia, Vancouver, V6T 1Z3, Canada.
Emily Y C ChangTerry Fox Laboratory, BC Cancer, Vancouver, V5Z 1L3, Canada.
Joanne LimFaculty of Pharmaceutical Sciences, University of British Columbia, Vancouver, V6T 1Z3, Canada.
Harwood H KwanFaculty of Pharmaceutical Sciences, University of British Columbia, Vancouver, V6T 1Z3, Canada.
David MonchaudInstitut de Chimie Moléculaire, ICMUB CNRS UMR 6302, UBFC Dijon, 21078 Dijon, France.ORCID https://orcid.org/0000-0002-3056-9295
Stephen YipDepartment of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, V6T 2B5 Canada.ORCID https://orcid.org/0000-0002-8514-9861
Peter C StirlingTerry Fox Laboratory, BC Cancer, Vancouver, V5Z 1L3, Canada.
Judy M Y WongFaculty of Pharmaceutical Sciences, University of British Columbia, Vancouver, V6T 1Z3, Canada.ORCID https://orcid.org/0000-0001-5572-4143
University of British Columbia · CATerry Fox Research Institute · CACentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

About 10-15% of all human cancer cells employ a telomerase-independent recombination-based telomere maintenance method, known as alternative lengthening of telomere (ALT), of which the full mechanism remains incompletely understood. While implicated in previous studies as the initiating signals for ALT telomere repair, the prevalence of non-canonical nucleic acid structures in ALT cancers remains unclear. Extending earlier reports, we observe higher levels of DNA/RNA hybrids (R-loops) in ALT-positive (ALT+) compared to telomerase-positive (TERT+) cells. Strikingly, we observe even more pronounced differences for an associated four-stranded nucleic acid structure, G-quadruplex (G4). G4 signals are found at the telomere and are broadly associated with telomere length and accompanied by DNA damage markers. We establish an interdependent relationship between ALT-associated G4s and R-loops and confirm that these two structures can be spatially linked into unique structures, G-loops, at the telomere. Additionally, stabilization of G4s and R-loops cooperatively enhances ALT-activity. However, co-stabilization at higher doses resulted in cytotoxicity in a synergistic manner. Nuclear G4 signals are significantly and reproducibly different between ALT+ and TERT+ low-grade glioma tumours. Together, we present G4 as a novel hallmark of ALT cancers with potential future applications as a convenient biomarker for identifying ALT+ tumours and as therapeutic targets.

Identifiers

PMID34316718
PMCPMC8294677
OpenAlexW3186062665

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.