Evidence map›Paper›PMID 34316397›Full record

ArticlePeerJ2021

Dairy management practices associated with multi-drug resistant fecal commensals and

Pranav S Pandit, Deniece R Williams, Paul Rossitto, John M Adaska, Richard Pereira, Terry W Lehenbauer, Barbara A Byrne, Xunde Li, Edward R Atwill, Sharif S Aly

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in PeerJ, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Impact of Farm Management Practices onFoods (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Pranav S PanditEpiCenter for Disease Dynamics, One Health Institute, School of Veterinary Medicine, University of California Davis, Davis, CA, The United States of America.ORCID 0000-0001-7649-0649
Deniece R WilliamsVeterinary Medicine Teaching and Research Center, University of California, Davis, Tulare, CA, The United States of America.ORCID 0000-0002-7534-732X
Paul RossittoVeterinary Medicine Teaching and Research Center, University of California, Davis, Tulare, CA, The United States of America.
John M AdaskaCalifornia Animal Health and Food Safety Laboratory System, University of California, Davis, Tulare, CA, The United States of America.
Richard PereiraDepartment of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, Davis, CA, The United States of America.ORCID 0000-0003-2028-8761
Terry W LehenbauerVeterinary Medicine Teaching and Research Center, University of California, Davis, Tulare, CA, The United States of America.ORCID 0000-0003-0896-3939
Barbara A ByrneDepartment of Pathology, Microbiology & Immunology, School of Veterinary Medicine, University of California, Davis, CA, The United States of America.ORCID 0000-0002-8907-1272
Xunde LiWestern Institute for Food Safety and Security, University of California, Davis, Davis, CA, The United States of America.
Edward R AtwillWestern Institute for Food Safety and Security, University of California, Davis, Davis, CA, The United States of America.
Sharif S AlyVeterinary Medicine Teaching and Research Center, University of California, Davis, Tulare, CA, The United States of America.ORCID 0000-0003-0330-5013
University of California, Davis · USInstitute for Food Safety and Health · USCenter for Disease Dynamics, Economics & Policy · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundUnderstanding the effects of herd management practices on the prevalence of multidrug-resistant pathogenic

methodsRandomly collected fecal samples from cull dairy cows from six dairy farms in central California were tested for multi-drug resistance phenotypes of

resultsThe decision tree classifier identified rolling herd average milk production as an important feature for predicting fecal shedding of multi-drug resistance in DISCUSSION: Percent culled and culling rate reflect the increase in culling over time adjusting for herd size and were associated with shedding multidrug resistant bacteria. In contrast, number culled was negatively associated with shedding multidrug resistant bacteria which may reflect producer decisions to prioritize the culling of otherwise healthy but low-producing cows based on milk or beef prices (with respect to dairy beef), amongst other factors. Using a data-driven suite of machine learning algorithms we identified generalizable and distant associations between antimicrobial resistance in

Indexed as

Antimicrobial resistanceCull cowsDairy cattleDecision tree classificationEnterococcusEscherichia coliGradient boostingRandom forestSalmonella

Identifiers

PMID34316397
PMCPMC8288115
OpenAlexW3183914180

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.