Evidence map›Paper›PMID 34316327›Full record

ArticleOncotarget2021

RNA expression differences in prostate tumors and tumor-adjacent stroma between Black and White Americans.

Farah Rahmatpanah, Gabriela De Robles, Michael Lilly, Thomas Keane, Vinay Kumar, Dan Mercola, Pavneet Randhawa, Michael McClelland

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
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  6. Effect of knocking out mouseAmerican journal of physiology. Gastrointestinal and liver physiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Farah RahmatpanahDepartment of Pathology and Laboratory Medicine, University of California, Irvine, CA 92697, USA.
Gabriela De RoblesDepartment of Pathology and Laboratory Medicine, University of California, Irvine, CA 92697, USA.
Michael LillyDepartment of Hematology and Oncology, Medical University of South Carolina, Charleston, SC 29425, USA.
Thomas KeaneDepartment of Urology, Medical University of South Carolina, Charleston, SC 29425, USA.
Vinay KumarDepartment of Pathology and Laboratory Medicine, University of California, Irvine, CA 92697, USA.
Dan MercolaDepartment of Pathology and Laboratory Medicine, University of California, Irvine, CA 92697, USA.
Pavneet RandhawaDepartment of Pathology and Laboratory Medicine, University of California, Irvine, CA 92697, USA.
Michael McClellandDepartment of Pathology and Laboratory Medicine, University of California, Irvine, CA 92697, USA.
University of California, Irvine · USMedical University of South Carolina · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Christine Hui · 1994 to 2026
$57.9M
University of California Health Participation in the National COVID Cohort Collaborative (N3C)UL1TR001414 · NCATS · UNIVERSITY OF CALIFORNIA-IRVINE · PI COOPER, DAN M, VILAIN, ERIC J. · 2015 to 2023
$35.1M
Sociobiological Responses to Stress in Prostate Cancer SurvivorsU54MD010706 · NIMHD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MELVIN, CATHY LEE · 2016 to 2020
$8.0M
The Prostate Cancer Tumor Microenvironment Exhibits Differentially Expressed GeneU01CA152738 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI LEE, CHUNG, MERCOLA, DAN · 2010 to 2015
$3.6M
Human Endogenous retroviruses as potential early markers for Alzheimer's diseaseR01CA226570 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI RAHMATPANAH, FARAH BAKHSHIAN · 2019 to 2023
$2.2M
NCATS NIH HHS UL1 TR001414NCI NIH HHS P30 CA062203NCI NIH HHS R01 CA226570NCI NIH HHS U01 CA152738NIMHD NIH HHS U54 MD010706
6 · The paper itself

Abstract

Prostate cancer (PCa) in Black Americans (BA) is diagnosed at an earlier median age and a more advanced stage than PCa in White Americans (WA). Tumor-adjacent stroma (TAS) plays a critical role in tumorigenesis of prostate cancer. We examined RNA expression in both tumor and TAS of BA compared to WA. After evaluating the geographical ancestry of each sample, preliminary analysis of our own RNA-seq data of 7 BA and 7 WA TAS revealed 1706 downregulated and 1844 upregulated genes in BA relative to WA PCa patients (

Indexed as

African ancestryEuropean ancestryprostate cancerRNA-seq analysistumor-adjacent stroma

Identifiers

PMID34316327
PMCPMC8310667
OpenAlexW3179132670

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.