Evidence map›Paper›PMID 34313921›Full record

ArticleMedical & biological engineering & computing2021

An atlas of classifiers-a machine learning paradigm for brain MRI segmentation.

Shiri Gordon, Boris Kodner, Tal Goldfryd, Michael Sidorov, Jacob Goldberger, Tammy Riklin Raviv

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Article in Medical & biological engineering & computing, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shiri GordonThe School of Electrical and Computer Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Boris KodnerThe School of Electrical and Computer Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Tal GoldfrydThe School of Electrical and Computer Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Michael SidorovThe School of Electrical and Computer Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Jacob GoldbergerThe Faculty of Electrical Engineering, Ber-Ilan University, Ramat-Gan, Israel.
Tammy Riklin RavivThe School of Electrical and Computer Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel. rrtammy@ee.bgu.ac.il.ORCID http://orcid.org/0000-0003-2532-5875

Funding

Israel Science Foundation 1638/16
6 · The paper itself

Abstract

We present the Atlas of Classifiers (AoC)-a conceptually novel framework for brain MRI segmentation. The AoC is a spatial map of voxel-wise multinomial logistic regression (LR) functions learned from the labeled data. Upon convergence, the resulting fixed LR weights, a few for each voxel, represent the training dataset. It can, therefore, be considered as a light-weight learning machine, which despite its low capacity does not underfit the problem. The AoC construction is independent of the actual intensities of the test images, providing the flexibility to train it on the available labeled data and use it for the segmentation of images from different datasets and modalities. In this sense, it does not overfit the training data, as well. The proposed method has been applied to numerous publicly available datasets for the segmentation of brain MRI tissues and is shown to be robust to noise and outreach commonly used methods. Promising results were also obtained for multi-modal, cross-modality MRI segmentation. Finally, we show how AoC trained on brain MRIs of healthy subjects can be exploited for lesion segmentation of multiple sclerosis patients.

Indexed as

BrainMultiple SclerosisHumansMachine LearningMagnetic Resonance ImagingNeuroimagingBrain MRILogistic regression classifiersMachine learningMS-lesionsSegmentation

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.