Evidence map›Paper›PMID 34312548›Full record

ArticleNature immunology2021

Essential role of a ThPOK autoregulatory loop in the maintenance of mature CD4

Jayati Basu, Bernardo S Reis, Suraj Peri, Jikun Zha, Xiang Hua, Lu Ge, Kyle Ferchen, Emmanuelle Nicolas, Philip Czyzewicz, Kathy Q Cai and 7 more

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Intraepithelial Lymphocytes of the Intestine.Annual review of immunology · 2024
    Review
  3. Pathways and mechanisms of CD4Trends in immunology · 2024
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Jayati BasuBlood Cell Development and Cancer, Fox Chase Cancer Center, Philadelphia, PA, USA.
Bernardo S ReisLaboratory of Mucosal Immunology, The Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0002-6841-116X
Suraj PeriBiostatistics and Bioinformatics, Fox Chase Cancer Center, Philadelphia, PA, USA.
Jikun ZhaBlood Cell Development and Cancer, Fox Chase Cancer Center, Philadelphia, PA, USA.
Xiang HuaBlood Cell Development and Cancer, Fox Chase Cancer Center, Philadelphia, PA, USA.
Lu GeBlood Cell Development and Cancer, Fox Chase Cancer Center, Philadelphia, PA, USA.
Kyle FerchenDivision of Immunobiology and Center for Systems Immunology, Cincinnati Children's Hospital 10 Medical Center, Cincinnati, OH, USA.
Emmanuelle NicolasBlood Cell Development and Cancer, Fox Chase Cancer Center, Philadelphia, PA, USA.
Philip CzyzewiczBlood Cell Development and Cancer, Fox Chase Cancer Center, Philadelphia, PA, USA.
Kathy Q CaiCancer Signaling and Epigenetics, Fox Chase Cancer Center, Philadelphia, PA, USA.
Yinfei TanCancer Biology, Fox Chase Cancer Center, Philadelphia, PA, USA.
Juan I Fuxman BassProgram in Systems Biology, Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA, USA.
Albertha J M WalhoutProgram in Systems Biology, Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA, USA.
H Leighton GrimesDivision of Immunobiology and Center for Systems Immunology, Cincinnati Children's Hospital 10 Medical Center, Cincinnati, OH, USA.ORCID http://orcid.org/0000-0001-8162-6758
Sergei I GrivennikovCancer Prevention and Control, Fox Chase Cancer Center, Philadelphia, PA, USA.
Daniel MucidaLaboratory of Mucosal Immunology, The Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0002-0000-0452
Dietmar J KappesBlood Cell Development and Cancer, Fox Chase Cancer Center, Philadelphia, PA, USA. dietmar.kappes@fccc.edu.ORCID http://orcid.org/0000-0002-9112-509X
Fox Chase Cancer Center · USCincinnati Children's Hospital Medical Center · USRockefeller University · USUniversity of Massachusetts Chan Medical School · USCedars-Sinai Medical Center · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
Gene regulatory and metabolic network structure, function and evolutionR35GM122502 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI A. J. Marian Walhout · 2017 to 2026
$8.3M
Training Program in Cancer TherapeuticsT32CA117846 · NCI · UNIVERSITY OF CINCINNATI · PI PRICE, CAROLYN M, TAKIAR, VINITA · 2006 to 2022
$6.5M
Identifying transcription factor binding sites in the C. elegans genomeR01GM082971 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WALHOUT, A. J. MARIAN · 2008 to 2016
$5.8M
The role of Interleukin 17RB signaling in colorectal cancer progressionR01CA227629 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI GRIVENNIKOV, SERGEI I · 2018 to 2022
$2.5M
Mechanisms of cytokine driven tumor elicited inflammation in colorectal cancerR01CA218133 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI GRIVENNIKOV, SERGEI I · 2018 to 2022
$2.4M
Transcriptional Control of Th-POK, a Key Regulator of Lineage ControlR01AI068907 · NIAID · RESEARCH INST OF FOX CHASE CAN CTR · PI KAPPES, DIETMAR J · 2008 to 2011
$2.0M
Dissecting the role of ThPOK in thymic development and T cell differentiationR01GM107179 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI KAPPES, DIETMAR J · 2014 to 2017
$1.4M
NCI NIH HHS P30 CA006927NCI NIH HHS R01 CA218133NCI NIH HHS R01 CA227629NCI NIH HHS T32 CA117846NIAID NIH HHS R01 AI068907NIGMS NIH HHS R01 GM082971NIGMS NIH HHS R01 GM107179NIGMS NIH HHS R35 GM122502
6 · The paper itself

Abstract

The transcription factor ThPOK (encoded by the Zbtb7b gene) controls homeostasis and differentiation of mature helper T cells, while opposing their differentiation to CD4

Indexed as

AnimalsCell DifferentiationColitisDisease Models, AnimalDNA-Binding ProteinsFemaleIntestinal MucosaIntraepithelial LymphocytesMaleMiceMice, Inbred C57BLMice, KnockoutT-Lymphocytes, Helper-InducerT-Lymphocytes, RegulatoryTranscription FactorsTranscription, GeneticDNA-Binding ProteinsTranscription FactorsZbtb7b protein, mouse

Identifiers

PMID34312548
PMCPMC8887595
OpenAlexW3183538648

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.