Evidence map›Paper›PMID 34312450›Full record

ArticleScientific reports2021

Deep radiomics-based survival prediction in patients with chronic obstructive pulmonary disease.

Jihye Yun, Young Hoon Cho, Sang Min Lee, Jeongeun Hwang, Jae Seung Lee, Yeon-Mok Oh, Sang-Do Lee, Li-Cher Loh, Choo-Khoon Ong, Joon Beom Seo and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jihye YunDepartment of Radiology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea.
Young Hoon ChoDepartment of Radiology, Korea University Guro Hospital, Korea University College of Medicine, Seoul, South Korea.
Sang Min LeeDepartment of Radiology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea.
Jeongeun HwangDepartment of Medicine, University of Ulsan College of Medicine, Seoul, South Korea.
Jae Seung LeeDepartment of Pulmonary and Critical Care Medicine and Clinical Research Center for Chronic Obstructive Airway Diseases, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea.
Yeon-Mok OhDepartment of Pulmonary and Critical Care Medicine and Clinical Research Center for Chronic Obstructive Airway Diseases, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea.
Sang-Do LeeDepartment of Pulmonary and Critical Care Medicine and Clinical Research Center for Chronic Obstructive Airway Diseases, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea.
Li-Cher LohDepartment of Medicine, RCSI & UCD Malaysia Campus, Penang, Malaysia.
Choo-Khoon OngDepartment of Medicine, RCSI & UCD Malaysia Campus, Penang, Malaysia.
Joon Beom SeoDepartment of Radiology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea. seojb@amc.seoul.kr.
Namkug KimDepartment of Radiology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea. namkugkim@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heterogeneous clinical manifestations and progression of chronic obstructive pulmonary disease (COPD) affect patient health risk assessment, stratification, and management. Pulmonary function tests are used to diagnose and classify the severity of COPD, but they cannot fully represent the type or range of pathophysiologic abnormalities of the disease. To evaluate whether deep radiomics from chest computed tomography (CT) images can predict mortality in patients with COPD, we designed a convolutional neural network (CNN) model for extracting representative features from CT images and then performed random survival forest to predict survival in COPD patients. We trained CNN-based binary classifier based on six-minute walk distance results (> 440 m or not) and extracted high-throughput image features (i.e., deep radiomics) directly from the last fully connected layer of it. The various sizes of fully connected layers and combinations of deep features were experimented using a discovery cohort with 344 patients from the Korean Obstructive Lung Disease cohort and an external validation cohort with 102 patients from Penang General Hospital in Malaysia. In the integrative analysis of discovery and external validation cohorts, with combining 256 deep features from the coronal slice of the vertebral body and two sagittal slices of the left/right lung, deep radiomics for survival prediction achieved concordance indices of 0.8008 (95% CI, 0.7642-0.8373) and 0.7156 (95% CI, 0.7024-0.7288), respectively. Deep radiomics from CT images could be used to predict mortality in COPD patients.

Indexed as

Neural Networks, ComputerAgedCohort StudiesDeep LearningFemaleHumansMalaysiaMaleMiddle AgedPredictive Value of TestsPulmonary Disease, Chronic ObstructiveRepublic of KoreaRespiratory Function TestsSurvival AnalysisTomography, X-Ray Computed

Identifiers

PMID34312450
PMCPMC8313653

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.