Evidence map›Paper›PMID 34312306›Full record

ArticleeNeuro

Heterogeneous Expression of Nuclear Encoded Mitochondrial Genes Distinguishes Inhibitory and Excitatory Neurons.

Meghan E Wynne, Alicia R Lane, Kaela S Singleton, Stephanie A Zlatic, Avanti Gokhale, Erica Werner, Duc Duong, Jennifer Q Kwong, Amanda J Crocker, Victor Faundez

Abstract read
In one paragraph

Article in eNeuro. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Meghan E WynneDepartment of Cell Biology, Emory University, Atlanta, GA 30322.
Alicia R LaneDepartment of Cell Biology, Emory University, Atlanta, GA 30322.
Kaela S SingletonDepartment of Cell Biology, Emory University, Atlanta, GA 30322.
Stephanie A ZlaticDepartment of Cell Biology, Emory University, Atlanta, GA 30322.ORCID 0000-0003-0758-9500
Avanti GokhaleDepartment of Cell Biology, Emory University, Atlanta, GA 30322.ORCID 0000-0001-7432-8541
Erica WernerDepartment of Cell Biology, Emory University, Atlanta, GA 30322.
Duc DuongDepartment of Biochemistry, Emory University, Atlanta, GA 30322.ORCID 0000-0001-5880-1888
Jennifer Q KwongDepartment of Pediatrics, Emory University, Atlanta, GA 30322.
Amanda J CrockerProgram in Neuroscience, Middlebury College, Middlebury, VT 05753 vfaunde@emory.edu acrocker@middlebury.edu.ORCID 0000-0003-1768-7841
Victor FaundezDepartment of Cell Biology, Emory University, Atlanta, GA 30322 vfaunde@emory.edu acrocker@middlebury.edu.ORCID 0000-0002-2114-5271

Funding

TRAINING IN TRANSLATIONAL RESEARCH IN NEUROLOGYT32NS007480 · NINDS · EMORY UNIVERSITY · PI LEVEY, ALLAN I · 2000 to 2020
$4.5M
Neuronal Mechanisms of Copper Transport and ToxicityRF1AG060285 · NIA · EMORY UNIVERSITY · PI FAUNDEZ, VICTOR · 2018 to 2021
$2.4M
Integrity and localization of Mitochondria in Menkes Disease PathogenesisK00NS108539 · NINDS · EMORY UNIVERSITY · PI SINGLETON, KAELA S. · 2020 to 2023
$339k
Mitochondrial-dependent Mechanisms of Apolipoprotein E Gene Expression in the Mammalian BrainF31AG067623 · NIA · EMORY UNIVERSITY · PI WYNNE, MEGHAN ELYSE · 2020 to 2023
$126k
NIA NIH HHS RF1 AG060285NINDS NIH HHS K00 NS108539NINDS NIH HHS T32 NS007480
6 · The paper itself

Abstract

Mitochondrial composition varies by organ and their constituent cell types. This mitochondrial diversity likely determines variations in mitochondrial function. However, the heterogeneity of mitochondria in the brain remains underexplored despite the large diversity of cell types in neuronal tissue. Here, we used molecular systems biology tools to address whether mitochondrial composition varies by brain region and neuronal cell type in mice. We reasoned that proteomics and transcriptomics of microdissected brain regions combined with analysis of single-cell mRNA sequencing (scRNAseq) could reveal the extent of mitochondrial compositional diversity. We selected nuclear encoded gene products forming complexes of fixed stoichiometry, such as the respiratory chain complexes and the mitochondrial ribosome, as well as molecules likely to perform their function as monomers, such as the family of SLC25 transporters. We found that the proteome encompassing these nuclear-encoded mitochondrial genes and obtained from microdissected brain tissue segregated the hippocampus, striatum, and cortex from each other. Nuclear-encoded mitochondrial transcripts could only segregate cell types and brain regions when the analysis was performed at the single-cell level. In fact, single-cell mitochondrial transcriptomes were able to distinguish glutamatergic and distinct types of GABAergic neurons from one another. Within these cell categories, unique SLC25A transporters were able to identify distinct cell subpopulations. Our results demonstrate heterogeneous mitochondrial composition across brain regions and cell types. We postulate that mitochondrial heterogeneity influences regional and cell type-specific mechanisms in health and disease.

Indexed as

Genes, MitochondrialNeuronsAnimalsCell NucleusHippocampusMiceMitochondriaGABAglutamatemitochondriamitochondrial ribosomerespiratory chainsolute transporter

Identifiers

PMID34312306
PMCPMC8387155

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.