Evidence map›Paper›PMID 34312180›Full record

ArticleCancer research2021

RNA Splicing Factors SRRM3 and SRRM4 Distinguish Molecular Phenotypes of Castration-Resistant Neuroendocrine Prostate Cancer.

Mark P Labrecque, Lisha G Brown, Ilsa M Coleman, Bryce Lakely, Nicholas J Brady, John K Lee, Holly M Nguyen, Dapei Li, Brian Hanratty, Michael C Haffner and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
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  6. Framework for the Pathology Workup of Metastatic Castration-Resistant Prostate Cancer Biopsies.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 1 country.

Mark P LabrecqueDepartment of Urology, University of Washington, Seattle, Washington.ORCID 0000-0001-7887-7599
Lisha G BrownDepartment of Urology, University of Washington, Seattle, Washington.
Ilsa M ColemanDivison of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Bryce LakelyDepartment of Urology, University of Washington, Seattle, Washington.
Nicholas J BradyDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York.ORCID 0000-0002-2928-0232
John K LeeDivison of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington.ORCID 0000-0002-6570-2180
Holly M NguyenDepartment of Urology, University of Washington, Seattle, Washington.
Dapei LiDepartment of Medicine, Division of Medical Oncology, University of Washington, Seattle, Washington.
Brian HanrattyDivison of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington.ORCID 0000-0003-4580-649X
Michael C HaffnerDivison of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington.
David S RickmanDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York.
Lawrence D TrueDepartment of Urology, University of Washington, Seattle, Washington.
Daniel W LinDepartment of Urology, University of Washington, Seattle, Washington.
Hung-Ming LamDepartment of Urology, University of Washington, Seattle, Washington.
Joshi J AlumkalDepartment of Internal Medicine, Rogel Cancer Center, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-1278-0166
Eva CoreyDepartment of Urology, University of Washington, Seattle, Washington.ORCID 0000-0002-9244-3807
Peter S NelsonDivison of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington. cmorriss@uw.edu pnelson@fhcrc.org.
Colm MorrisseyDepartment of Urology, University of Washington, Seattle, Washington. cmorriss@uw.edu pnelson@fhcrc.org.
University of Washington · USFred Hutch Cancer Center · USCornell University · USUniversity of Washington Medical Center · USMichigan Medicine · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
TRANSCRIPTOME AND PROTEOME STRATIFICATION OF PROSTATE ADENOCARCINOMA PHENOTYPESP50CA097186 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PETER S NELSON · 2002 to 2026
$58.1M
Tissue/InformaticsP50CA186786 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Ganesh S Palapattu · 2014 to 2026
$27.6M
Steroid Metabolism in Castration-Resistant Prostate CancerP01CA163227 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI PETER S NELSON · 2013 to 2026
$25.0M
Defining and Targeting Lineage Transition Programs Operative in AR Pathway Independent Prostate CancerR01CA234715 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI NELSON, PETER S · 2020 to 2024
$2.0M
High-Performance Compute Cluster for Comprehensive Cancer and Infectious Diseases ResearchS10OD028685 · OD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BRADLEY, PHILIP · 2020 to 2020
$2.0M
Targeting Prostate Cancer Lineage Plasticity with BET Bromodomain InhibitionR01CA251245 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ALUMKAL, JOSHI JAMES · 2020 to 2024
$1.9M
NCI NIH HHS P01 CA163227NCI NIH HHS P30 CA015704NCI NIH HHS P50 CA097186NCI NIH HHS P50 CA186786NCI NIH HHS R01 CA234715NCI NIH HHS R01 CA251245NIH HHS S10 OD028685
6 · The paper itself

Abstract

Neuroendocrine (NE) differentiation in metastatic castration-resistant prostate cancer (mCRPC) is an increasingly common clinical feature arising from cellular plasticity. We recently characterized two mCRPC phenotypes with NE features: androgen receptor (AR)-positive NE-positive amphicrine prostate cancer (AMPC) and AR-negative small cell or neuroendocrine prostate cancer (SCNPC). Here, we interrogated the regulation of RE1-silencing transcription factor (REST), a transcriptional repressor of neuronal genes, and elucidated molecular programs driving AMPC and SCNPC biology. Analysis of prostate cancer cell lines, mCRPC specimens, and LuCaP patient-derived xenograft models detected alternative splicing of REST to REST4 and attenuated REST repressor activity in AMPC and SCNPC. The REST locus was also hypermethylated and REST expression was reduced in SCNPC. While serine/arginine repetitive matrix protein 4 (SRRM4) was previously implicated in alternative splicing of REST in mCRPC, we detected SRRM3 expression in REST4-positive, SRRM4-negative AMPC, and SCNPC. In CRPC cell lines, SRRM3 induced alternative splicing of REST to REST4 and exacerbated the expression of REST-repressed genes. Furthermore, SRRM3 and SRRM4 expression defined molecular subsets of AMPC and SCNPC across species and tumor types. Two AMPC phenotypes and three SCNPC phenotypes were characterized, denoted either by REST attenuation and ASCL1 activity or by progressive activation of neuronal transcription factor programs, respectively. These results nominate SRRM3 as the principal REST splicing factor expressed in early NE differentiation and provide a framework to molecularly classify diverse NE phenotypes in mCRPC. SIGNIFICANCE: This study identifies SRRM3 as a key inducer of cellular plasticity in prostate cancer with neuroendocrine features and delineates distinct neuroendocrine phenotypes to inform therapeutic development and precision medicine applications.

Indexed as

Alternative SplicingBiomarkers, TumorCarcinoma, NeuroendocrineCell Line, TumorEctopic Gene ExpressionGene Expression Regulation, NeoplasticHumansImmunohistochemistryMaleNerve Tissue ProteinsProstatic Neoplasms, Castration-ResistantProteinsRE1-Silencing Transcription FactorRepressor ProteinsRNA Splicing FactorsBiomarkers, TumorNerve Tissue ProteinsProteinsRE1-Silencing Transcription FactorRepressor ProteinsRNA Splicing FactorsSRRM3 protein, humanSRRM4 protein, human

Identifiers

PMID34312180
PMCPMC8448969
OpenAlexW3183703446

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.