Evidence map›Paper›PMID 34311581›Full record

ArticlemBio2021

Interplay between Nucleoid-Associated Proteins and Transcription Factors in Controlling Specialized Metabolism in

Xiafei Zhang, Sara N Andres, Marie A Elliot

Open access · goldAbstract read
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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  12. Cryptic specialized metabolites driveProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Xiafei ZhangDepartment of Biology, McMaster Universitygrid.25073.33, Hamilton, Ontario, Canada.
Sara N AndresDepartment of Biochemistry and Biomedical Sciences, McMaster Universitygrid.25073.33, Hamilton, Ontario, Canada.
Marie A ElliotDepartment of Biology, McMaster Universitygrid.25073.33, Hamilton, Ontario, Canada.
McMaster University · CA

Funding

CIHR PJT-162340
6 · The paper itself

Abstract

Lsr2 is a small nucleoid-associated protein found throughout the actinobacteria. Lsr2 functions similarly to the well-studied H-NS, in that it preferentially binds AT-rich sequences and represses gene expression. In Streptomyces venezuelae, Lsr2 represses the expression of many specialized metabolic clusters, including the chloramphenicol antibiotic biosynthetic gene cluster, and deleting

Indexed as

Multigene FamilyBacterial ProteinsBiosynthetic PathwaysChloramphenicolGene Expression Regulation, BacterialStreptomycesTranscription FactorsBacterial ProteinsChloramphenicolTranscription FactorsactivatorantibioticchloramphenicolcountersilencingLsr2nucleoid-associated proteinrepressorStreptomyces

Identifiers

PMID34311581
PMCPMC8406272
OpenAlexW3184776093

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.